RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 A6NIN4 97 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 OR5B21A6NL26 309 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 OR4C45A6NMZ5 311 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 B4DSR2 109 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 E9PI62 339 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 ZNF205O95201 554 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 FSTL3O95633 263 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 TGFAP01135 160 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 ISG15P05161 165 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 CCDC159P0C7I6 412 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 THBS2P35442 1172 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 TGM4P49221 684 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 GPM6AP51674 278 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 GNG3P63215 75 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 FAM201AQ5SY85 155 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 OR2G6Q5TZ20 316 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 TMEM42Q69YG0 159 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 FAM166AQ6J272 317 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 BOLLQ8N9W6 283 aaKnown RBP11.41□□□□□ -0.58
SHMT2-228ENST00000557302 OR5A2Q8NGI9 324 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 FGF23Q9GZV9 251 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-228ENST00000557302 TLNRD1Q9H1K6 362 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 GPR173Q9NS66 373 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 SCN3BQ9NY72 215 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 CLEC2DQ9UHP7 191 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 HHLA2Q9UM44 414 aa11.41□□□□□ -0.58
SHMT2-228ENST00000557302 ANKRD61A6NGH8 418 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 TMEM212A6NML5 194 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 A8MV72 311 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-228ENST00000557302 ZNF732B4DXR9 585 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 FAM157AC9JC47 383 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 SLC1A7O00341 560 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 CDIPTO14735 213 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 RPSAP08865 295 aaKnown RBP11.4□□□□□ -0.58
SHMT2-228ENST00000557302 CCDC58Q4VC31 144 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 FAM76BQ5HYJ3 339 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 DMRTC1Q5HYR2 192 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 WDR82Q6UXN9 313 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 C11orf53Q8IXP5 236 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 OR52N1Q8NH53 320 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 OR5AK2Q8NH90 309 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 LRRC29Q8WV35 223 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 RPL3LQ92901 407 aaKnown RBP11.4□□□□□ -0.58
SHMT2-228ENST00000557302 C10orf35Q96D05 121 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 COMMD4Q9H0A8 199 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 PATZ1Q9HBE1 687 aaKnown RBP11.4□□□□□ -0.58
SHMT2-228ENST00000557302 TMEM165Q9HC07 324 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 FKBP14Q9NWM8 211 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 KCNS2Q9ULS6 477 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 RAB26Q9ULW5 256 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 ABCA2Q9BZC7 2435 aa11.4□□□□□ -0.58
SHMT2-228ENST00000557302 FN1P02751 2386 aaKnown RBP11.39□□□□□ -0.59
SHMT2-228ENST00000557302 TRBV2A0A0J9YWF9 115 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 CEACAM18A8MTB9 384 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 C3orf80F5H4A9 247 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 LGALS8O00214 317 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 MYL12BO14950 172 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 LMX1BO60663 402 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 GATBO75879 557 aaKnown RBP11.39□□□□□ -0.59
SHMT2-228ENST00000557302 ZFPL1O95159 310 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 SERPINA3P01011 423 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 MSMBP08118 114 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 ZNF20P17024 532 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 C21orf33P30042 268 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-228ENST00000557302 CD80P33681 288 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 GTF2A1P52655 376 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-228ENST00000557302 KCNJ8Q15842 424 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 ZNF404Q494X3 552 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 RPL22L1Q6P5R6 122 aaKnown RBP11.39□□□□□ -0.59
SHMT2-228ENST00000557302 GCSAMQ8N6F7 178 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 SCCPDHQ8NBX0 429 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 DEFB108BQ8NET1 73 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 OR13C3Q8NGS6 347 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 OR10Z1Q8NGY1 313 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 OR10AC1Q8NH08 325 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 OR51F2Q8NH61 342 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 GATAD2BQ8WXI9 593 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 PP6455Q8WZ26 134 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 MYDGFQ969H8 173 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 TECTBQ96PL2 329 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 PDCD1LG2Q9BQ51 273 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 TMEM246Q9BRR3 403 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 CHST5Q9GZS9 411 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 OR51I2Q9H344 312 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 METTL17Q9H7H0 456 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-228ENST00000557302 LPAR2Q9HBW0 351 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 TRIM36Q9NQ86 728 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 BABAM2Q9NXR7 383 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 ERVK-18Q9QC07 812 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 SLC7A11Q9UPY5 501 aa11.39□□□□□ -0.59
SHMT2-228ENST00000557302 YLPM1P49750 1951 aaKnown RBP11.38□□□□□ -0.59
SHMT2-228ENST00000557302 TRAV38-1A0A0B4J264 116 aa11.38□□□□□ -0.59
SHMT2-228ENST00000557302 OOEPA6NGQ2 149 aa11.38□□□□□ -0.59
SHMT2-228ENST00000557302 INAFM1C9JVW0 142 aa11.38□□□□□ -0.59
SHMT2-228ENST00000557302 PTGES3LE9PB15 166 aa11.38□□□□□ -0.59
SHMT2-228ENST00000557302 LHBP01229 141 aa11.38□□□□□ -0.59
SHMT2-228ENST00000557302 RPS2P15880 293 aaKnown RBP11.38□□□□□ -0.59
SHMT2-228ENST00000557302 EGR1P18146 543 aa11.38□□□□□ -0.59
SHMT2-228ENST00000557302 CPT2P23786 658 aa11.38□□□□□ -0.59
SHMT2-228ENST00000557302 CFHR2P36980 270 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms