RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 TGFBR2P37173 567 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 CRYBB2P43320 205 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 SRP9P49458 86 aaKnown RBP10.83□□□□□ -0.68
SHMT2-227ENST00000557269 TESK1Q15569 626 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 ZNF529Q6P280 563 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 CRIP3Q6Q6R5 217 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 ZNF826PQ6ZT77 177 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 UTS2BQ765I0 119 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 CEACAM19Q7Z692 300 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 SERPINA12Q8IW75 414 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 LRRC75A-AS1Q8N1F1 130 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 MS4A15Q8N5U1 240 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 OR1M1Q8NGA1 313 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 OR5A2Q8NGI9 324 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 PP6455Q8WZ26 134 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 TMIGD2Q96BF3 282 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 MICU1Q9BPX6 476 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 RTL8AQ9BWD3 113 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 EGLN1Q9GZT9 426 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 NOX4Q9NPH5 578 aa10.83□□□□□ -0.68
SHMT2-227ENST00000557269 SETXQ7Z333 2677 aaKnown RBP10.82□□□□□ -0.68
SHMT2-227ENST00000557269 IGHV1-69-2A0A0G2JMI3 117 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-227ENST00000557269 FAM230AA0A1W2PPH8 454 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 CCRL2O00421 344 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 SERPINA3P01011 423 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 TFAP2AP05549 437 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 IGFBP3P17936 291 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-227ENST00000557269 GABRA5P31644 462 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 GATA4P43694 442 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 ZNF154Q13106 437 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 FAM76BQ5HYJ3 339 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 DNM1P46Q6ZS02 220 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 CELF2-AS1Q8N7Q2 184 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 SPERTQ8NA61 448 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 OR5D14Q8NGL3 314 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 CCL17Q92583 94 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 RDH5Q92781 318 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 RPL3LQ92901 407 aaKnown RBP10.82□□□□□ -0.68
SHMT2-227ENST00000557269 HIST1H2AAQ96QV6 131 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 NKX3-1Q99801 234 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-227ENST00000557269 MRPS26Q9BYN8 205 aaKnown RBP10.82□□□□□ -0.68
SHMT2-227ENST00000557269 OR51I2Q9H344 312 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 ABCB9Q9NP78 766 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 C14orf119Q9NWQ9 140 aa10.82□□□□□ -0.68
SHMT2-227ENST00000557269 NOP16Q9Y3C1 178 aaKnown RBP10.82□□□□□ -0.68
SHMT2-227ENST00000557269 ANKRD17O75179 2603 aaKnown RBP10.82□□□□□ -0.68
SHMT2-227ENST00000557269 CSMD1Q96PZ7 3565 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 NAV2Q8IVL1 2488 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 CHD3Q12873 2000 aaKnown RBP10.81□□□□□ -0.68
SHMT2-227ENST00000557269 GABRPO00591 440 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 SULT1B1O43704 296 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 GPX5O75715 221 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 RHBDL1O75783 438 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 GATBO75879 557 aaKnown RBP10.81□□□□□ -0.68
SHMT2-227ENST00000557269 RGS9O75916 674 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-227ENST00000557269 CD2P06729 351 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 TNFRSF1AP19438 455 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 AZGP1P25311 298 aaKnown RBP10.81□□□□□ -0.68
SHMT2-227ENST00000557269 ART1P52961 327 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 GNG3P63215 75 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 MRPS11P82912 194 aaKnown RBP10.81□□□□□ -0.68
SHMT2-227ENST00000557269 CARTPTQ16568 116 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 CD200R1LQ6Q8B3 271 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 ANGPTL5Q86XS5 388 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 CALHM1Q8IU99 346 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 SCCPDHQ8NBX0 429 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 YIPF6Q96EC8 236 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 SPACA5Q96QH8 159 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 FOXC2Q99958 501 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 TLNRD1Q9H1K6 362 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 OR51E2Q9H255 320 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 METTL17Q9H7H0 456 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-227ENST00000557269 BARX1Q9HBU1 254 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-227ENST00000557269 C1orf123Q9NWV4 160 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 ITGB1BP2Q9UKP3 347 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 PPP1R3CQ9UQK1 317 aa10.81□□□□□ -0.68
SHMT2-227ENST00000557269 TRDV1A0A1B0GX56 115 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 LRP5LA4QPB2 252 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 OR5B21A6NL26 309 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 A6NLC8 198 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 CDIPTO14735 213 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 SYNGR1O43759 233 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 ALX3O95076 343 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 CYB5R3P00387 301 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-227ENST00000557269 UCHL1P09936 223 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 CD36P16671 472 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 RAB3AP20336 220 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 GADD45AP24522 165 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 PSMA1P25786 263 aaKnown RBP10.8□□□□□ -0.68
SHMT2-227ENST00000557269 ALDH3B2P48448 385 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 FUT6P51993 359 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 CNN3Q15417 329 aaKnown RBP10.8□□□□□ -0.68
SHMT2-227ENST00000557269 TRAM1Q15629 374 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 Q5PR19 223 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 FAM201AQ5SY85 155 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 HAGHLQ6PII5 290 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-227ENST00000557269 OR52N4Q8NGI2 321 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 Q8TCH9 128 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 RFT1Q96AA3 541 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms