RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MAP2K3P46734 347 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 KRT74Q7RTS7 529 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 KRT77Q7Z794 578 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 AQP12AQ8IXF9 295 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 ZDHHC23Q8IYP9 409 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 PAPD5Q8NDF8 572 aaKnown RBP13.04□□□□□ -0.32
TUBB3-213ENST00000557262 OR8B12Q8NGG6 310 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 ANGPTL6Q8NI99 470 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 ITFG2Q969R8 447 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 CCDC124Q96CT7 223 aaKnown RBP13.04□□□□□ -0.32
TUBB3-213ENST00000557262 CLPTM1LQ96KA5 538 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 GAFA1Q96PS6 74 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 FGF23Q9GZV9 251 aaPredicted RBP13.04□□□□□ -0.32
TUBB3-213ENST00000557262 SLC25A10Q9UBX3 287 aaPredicted RBP13.04□□□□□ -0.32
TUBB3-213ENST00000557262 LAMP5Q9UJQ1 280 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 KLHDC2Q9Y2U9 406 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 BTBD17A6NE02 478 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 ANXA8P13928 327 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 SELLP14151 372 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 PRKACGP22612 351 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 GLRA1P23415 457 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 DCTDP32321 178 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 HCCSP53701 268 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 CAV3P56539 151 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 PROK1P58294 105 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 PSMA6P60900 246 aaKnown RBP13.03□□□□□ -0.32
TUBB3-213ENST00000557262 RPS7P62081 194 aaKnown RBP13.03□□□□□ -0.32
TUBB3-213ENST00000557262 TAF9Q16594 264 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 DGUOKQ16854 277 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 MIDNQ504T8 468 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 ASPHD2Q6ICH7 369 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 Q6ZSV7 163 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 CCDC197Q8NCU1 140 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 ZNF671Q8TAW3 534 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 HPSE2Q8WWQ2 592 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 TNFRSF14Q92956 283 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 THTPAQ9BU02 230 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 TEX12Q9BXU0 123 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 SEMA6AQ9H2E6 1030 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 C16orf95Q9H693 158 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 ZNRD1Q9P1U0 126 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 NLKQ9UBE8 527 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 LRP12Q9Y561 859 aa13.03□□□□□ -0.32
TUBB3-213ENST00000557262 A0A0U1RQV5 110 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 ZNF816-ZNF321PA0A0X1KG74 233 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 A0A1W2PRD5 423 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 A0A1W2PRF3 423 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 A0A1W2PRM7 423 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 OR2AT4A6NND4 320 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 M0R1W7 72 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 SIGLEC5O15389 551 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 E2F6O75461 281 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 TFF1P04155 84 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 NDUFB7P17568 137 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 SLC2A5P22732 501 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 GABRA2P47869 451 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 GPM6AP51674 278 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 UBE2E1P51965 193 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 DLX1P56177 255 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 GNG3P63215 75 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 PRB3Q04118 309 aaPredicted RBP13.02□□□□□ -0.33
TUBB3-213ENST00000557262 BLMHQ13867 455 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 CEACAM21Q3KPI0 293 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 KCTD18Q6PI47 426 aaPredicted RBP13.02□□□□□ -0.33
TUBB3-213ENST00000557262 DEGS2Q6QHC5 323 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 BBS1Q8NFJ9 593 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 OR5A2Q8NGI9 324 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 FAM81AQ8TBF8 368 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 YIPF3Q9GZM5 350 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 MMP27Q9H306 513 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 OR51I2Q9H344 312 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 METTL8Q9H825 291 aaKnown RBP13.02□□□□□ -0.33
TUBB3-213ENST00000557262 VPREB3Q9UKI3 123 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 WNK1Q9H4A3 2382 aa13.02□□□□□ -0.33
TUBB3-213ENST00000557262 VWFP04275 2813 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 TMEM269A0A1B0GVZ9 245 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 A0A1W2PQ09 198 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 ZNF732B4DXR9 585 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 RHBDL1O75783 438 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 TSPAN9O75954 239 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 FAM107AO95990 144 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 PAHP00439 452 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 ATP6V1B1P15313 513 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 TGFBR2P37173 567 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 KLRD1Q13241 179 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 APOFQ13790 326 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 TMEM236Q5W0B7 351 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 NCR3LG1Q68D85 454 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 DHRS7BQ6IAN0 325 aaPredicted RBP13.01□□□□□ -0.33
TUBB3-213ENST00000557262 HS3ST5Q8IZT8 346 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 DUS3LQ96G46 650 aaKnown RBP13.01□□□□□ -0.33
TUBB3-213ENST00000557262 TEAD3Q99594 435 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 RBM4BQ9BQ04 359 aaKnown RBP13.01□□□□□ -0.33
TUBB3-213ENST00000557262 MROQ9BYG7 248 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 YY1AP1Q9H869 796 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 SLC25A19Q9HC21 320 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 TCF7L1Q9HCS4 588 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 FAM206AQ9NX38 181 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 MAB21L2Q9Y586 359 aa13.01□□□□□ -0.33
TUBB3-213ENST00000557262 IGKV1D-17A0A075B6S4 117 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms