RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 LINC00052Q96N35 136 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 FOXB1Q99853 325 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 HRH4Q9H3N8 390 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 ABI3Q9P2A4 366 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 ZIC3O60481 467 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 ISG15P05161 165 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 PLAC9Q5JTB6 97 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 SPATA46Q5T0L3 261 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 FBXL14Q8N1E6 418 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 FNDC9Q8TBE3 224 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 SCARB1Q8WTV0 552 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 SGCZQ96LD1 299 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 UQCC2Q9BRT2 126 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 C5orf49A4QMS7 147 aa13.46□□□□□ -0.25
TMEM55B-207ENST00000557041 IFNA21P01568 189 aa13.46□□□□□ -0.25
TMEM55B-207ENST00000557041 IGFBP3P17936 291 aaPredicted RBP13.46□□□□□ -0.25
TMEM55B-207ENST00000557041 OR51F2Q8NH61 342 aa13.46□□□□□ -0.25
TMEM55B-207ENST00000557041 ST8SIA2Q92186 375 aa13.46□□□□□ -0.25
TMEM55B-207ENST00000557041 FBXO17Q96EF6 278 aa13.46□□□□□ -0.25
TMEM55B-207ENST00000557041 METTL9Q9H1A3 318 aa13.46□□□□□ -0.25
TMEM55B-207ENST00000557041 DHRS3O75911 302 aa13.46□□□□□ -0.26
TMEM55B-207ENST00000557041 APOC1P02654 83 aa13.46□□□□□ -0.26
TMEM55B-207ENST00000557041 FSTP19883 344 aa13.46□□□□□ -0.26
TMEM55B-207ENST00000557041 M6PRP20645 277 aa13.46□□□□□ -0.26
TMEM55B-207ENST00000557041 ECH1Q13011 328 aa13.46□□□□□ -0.26
TMEM55B-207ENST00000557041 SLC25A26Q70HW3 274 aa13.46□□□□□ -0.26
TMEM55B-207ENST00000557041 SUMF1Q8NBK3 374 aa13.46□□□□□ -0.26
TMEM55B-207ENST00000557041 OR5L1Q8NGL2 311 aa13.46□□□□□ -0.26
TMEM55B-207ENST00000557041 FBXW5Q969U6 566 aa13.46□□□□□ -0.26
TMEM55B-207ENST00000557041 IGHMP01871 453 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 FGF5P12034 268 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 SCAND1P57086 179 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 HERV-K104P61576 105 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 IAH1Q2TAA2 248 aaPredicted RBP13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 C1orf100Q5SVJ3 147 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 TMPRSS7Q7RTY8 843 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 OR5AS1Q8N127 324 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 UTP23Q9BRU9 249 aaKnown RBP13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 MOB1AQ9H8S9 216 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 C12orf4Q9NQ89 552 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 PKDREJQ9NTG1 2253 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 ATG2AQ2TAZ0 1938 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 RAD51DO75771 328 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 NRASP01111 189 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 ICAM2P13598 275 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 PTGS2P35354 604 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 C11orf87Q6NUJ2 197 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 MRPL21Q7Z2W9 205 aaKnown RBP13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 RPS4Y2Q8TD47 263 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 IL1F10Q8WWZ1 152 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 SCGB3A2Q96PL1 93 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 IGKV1-9A0A0C4DH69 117 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 RFPL4AA6NLU0 287 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 MPTX1A8MV57 137 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 RFPL4AL1F8VTS6 287 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 SCGNO76038 276 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 PRH1P02810 166 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 ITGB2P05107 769 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 CELA3AP09093 270 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 PSMB6P28072 239 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 RBP2P50120 134 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 TMEM50BP56557 158 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 PIGYQ3MUY2 71 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 CDCP2Q5VXM1 449 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 CDH26Q8IXH8 852 aa13.45□□□□□ -0.26
TMEM55B-207ENST00000557041 DIRAS3O95661 229 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 ZNF16P17020 682 aaPredicted RBP13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 FAM209AQ5JX71 171 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 ATP1A1-AS1Q5TC04 95 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 SGPP2Q8IWX5 399 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 OR5M8Q8NGP6 311 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 GPHA2Q96T91 129 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 B4GALT7Q9UBV7 327 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 BOKQ9UMX3 212 aaPredicted RBP13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 MED19A0JLT2 244 aaPredicted RBP13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 TNFSF12O43508 249 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 TGIF1Q15583 401 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 PDSS1Q5T2R2 415 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 OR1F12Q8NHA8 337 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 OR2V1Q8NHB1 315 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 ST3GAL6Q9Y274 331 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 CUL9Q8IWT3 2517 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 SUCLG1P53597 346 aaKnown RBP13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 MLF1P58340 268 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 PLP2Q04941 152 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 COL19A1Q14993 1142 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 PABPC1L2AQ5JQF8 200 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 TIPARPQ7Z3E1 657 aaKnown RBP13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 P4HA3Q7Z4N8 544 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 PXT1Q8NFP0 134 aa13.44□□□□□ -0.26
TMEM55B-207ENST00000557041 TPD52L2O43399 206 aaKnown RBP13.43□□□□□ -0.26
TMEM55B-207ENST00000557041 OR5H8P0DN80 308 aa13.43□□□□□ -0.26
TMEM55B-207ENST00000557041 RRASP10301 218 aa13.43□□□□□ -0.26
TMEM55B-207ENST00000557041 OMGP23515 440 aa13.43□□□□□ -0.26
TMEM55B-207ENST00000557041 MAGEA5P43359 124 aa13.43□□□□□ -0.26
TMEM55B-207ENST00000557041 RAC3P60763 192 aa13.43□□□□□ -0.26
TMEM55B-207ENST00000557041 FAM189A2Q15884 450 aa13.43□□□□□ -0.26
TMEM55B-207ENST00000557041 SWI5Q1ZZU3 235 aa13.43□□□□□ -0.26
TMEM55B-207ENST00000557041 ZNF385CQ66K41 422 aaPredicted RBP13.43□□□□□ -0.26
TMEM55B-207ENST00000557041 SECTM1Q8WVN6 248 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms