RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SLC2A5P22732 501 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 MAP2K3P46734 347 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 CBX1P83916 185 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 APOFQ13790 326 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 SNAPC1Q16533 368 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 METAP1DQ6UB28 335 aaPredicted RBP18.57■□□□□ 0.56
ACTN1-220ENST00000556433 ZNF788Q6ZQV5 615 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 ANGPTL6Q8NI99 470 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 C8orf46Q8TAG6 207 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 NPRL2Q8WTW4 380 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 GAFA1Q96PS6 74 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 YIPF3Q9GZM5 350 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 SLC25A19Q9HC21 320 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 TVP23BQ9NYZ1 205 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 DNAJB9Q9UBS3 223 aa18.57■□□□□ 0.56
ACTN1-220ENST00000556433 CAB39Q9Y376 341 aaPredicted RBP18.57■□□□□ 0.56
ACTN1-220ENST00000556433 ZNF816-ZNF321PA0A0X1KG74 233 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 TMEM269A0A1B0GVZ9 245 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 ACOD1A6NK06 481 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 PSMD9O00233 223 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 FKBP6O75344 327 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 EEF1B2P24534 225 aaKnown RBP18.56■□□□□ 0.56
ACTN1-220ENST00000556433 DCTDP32321 178 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 GPM6AP51674 278 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 GUCA2AQ02747 115 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 DGUOKQ16854 277 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 KCTD18Q6PI47 426 aaPredicted RBP18.56■□□□□ 0.56
ACTN1-220ENST00000556433 BRICD5Q6PL45 260 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 DEGS2Q6QHC5 323 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 Q8N7P7 452 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 TEAD3Q99594 435 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 SEMA6AQ9H2E6 1030 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 NLKQ9UBE8 527 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 SLC25A10Q9UBX3 287 aaPredicted RBP18.56■□□□□ 0.56
ACTN1-220ENST00000556433 RNF114Q9Y508 228 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 MEGF8Q7Z7M0 2845 aa18.56■□□□□ 0.56
ACTN1-220ENST00000556433 A0A1W2PRD5 423 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 A0A1W2PRF3 423 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 A0A1W2PRM7 423 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 ZNF732B4DXR9 585 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 RNASEK-C17orf49H0YIS7 233 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 GYG2O15488 501 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 RHBDL1O75783 438 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 ACAA1P09110 424 aaPredicted RBP18.55■□□□□ 0.56
ACTN1-220ENST00000556433 FBP1P09467 338 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 NDUFB7P17568 137 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 GLRA1P23415 457 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 GABRA2P47869 451 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 DLX1P56177 255 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 FLOT2Q14254 428 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 CEP78Q5JTW2 689 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 PAPD5Q8NDF8 572 aaKnown RBP18.55■□□□□ 0.56
ACTN1-220ENST00000556433 LINC01006Q8NI28 216 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 CITED1Q99966 193 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 MROQ9BYG7 248 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 OR51I2Q9H344 312 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 FAM206AQ9NX38 181 aa18.55■□□□□ 0.56
ACTN1-220ENST00000556433 A0A0U1RQV5 110 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 OR2AT4A6NND4 320 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 NPFFO15130 113 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 SIGLEC5O15389 551 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 MRPL3P09001 348 aaKnown RBP18.54■□□□□ 0.56
ACTN1-220ENST00000556433 CRISP1P54107 249 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 GNG3P63215 75 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 CEACAM21Q3KPI0 293 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 GDPGP1Q6ZNW5 385 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 C1orf122Q6ZSJ8 110 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 MOB3CQ70IA8 216 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 KRT74Q7RTS7 529 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 THAP5Q7Z6K1 395 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 COMMD2Q86X83 199 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 LRTOMTQ8WZ04 291 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 PBOV1Q9GZY1 135 aa18.54■□□□□ 0.56
ACTN1-220ENST00000556433 A0A1W2PQ09 198 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 KRTAP10-3P60369 221 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 DEFA6Q01524 100 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 RIPPLY1Q0D2K3 151 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 KLRD1Q13241 179 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 TAF9Q16594 264 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 DNAL1Q4LDG9 190 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 DMRTC1Q5HYR2 192 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 TRPM8Q7Z2W7 1104 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 ZNF671Q8TAW3 534 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 TNFRSF14Q92956 283 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 ITFG2Q969R8 447 aa18.53■□□□□ 0.56
ACTN1-220ENST00000556433 PAPOLBQ9NRJ5 636 aaKnown RBP18.53■□□□□ 0.56
ACTN1-220ENST00000556433 TCRBV3S1A0A5B6 114 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 BTBD17A6NE02 478 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 CCDC182A6NF36 153 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 GSC2O15499 205 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 ZNF254O75437 659 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 ATP6V1B1P15313 513 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 CAV3P56539 151 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 LCN1P1Q5VSP4 162 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 ZNF679Q8IYX0 411 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 PNKDQ8N490 385 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 ZSCAN4Q8NAM6 433 aaPredicted RBP18.52■□□□□ 0.56
ACTN1-220ENST00000556433 OR5A2Q8NGI9 324 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 OR51E1Q8TCB6 317 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 DNAJC9Q8WXX5 260 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms