RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 HLA-DQA2P01906 255 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 GYPAP02724 150 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 MT-ND1P03886 318 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 OPN1SWP03999 348 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 THY1P04216 161 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 HLA-DPB1P04440 258 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 TSPAN19P0C672 248 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 IDO1P14902 403 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 BGNP21810 368 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 PPIBP23284 216 aaKnown RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SAA4P35542 130 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SLC1A6P48664 564 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 POLR2JP52435 117 aaKnown RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 RAP1BP61224 184 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 RPL27P61353 136 aaKnown RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 RAP1AP62834 184 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SLC35A2P78381 396 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 EGFEM1PQ0D2K5 195 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SCARB2Q14108 478 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 MPPED2Q15777 294 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 LY6EQ16553 131 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SRSF7Q16629 238 aaKnown RBP eCLIP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 DUSP7Q16829 419 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 ALG10Q5BKT4 473 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 CASC10Q5T4H9 136 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 INTS11Q5TA45 600 aaKnown RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 NCR3LG1Q68D85 454 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 FAM57BQ71RH2 274 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 ASRGL1Q7L266 308 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 RNF144BQ7Z419 303 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 Q8N2B8 174 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 Q8N7P7 452 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SMYD1Q8NB12 490 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 OR6T1Q8NGN1 323 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 MOSPD2Q8NHP6 518 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 ADAMTS16Q8TE57 1224 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 WIPF2Q8TF74 440 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 ST8SIA4Q92187 359 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 GTF2H4Q92759 462 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 TNFRSF14Q92956 283 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 APOBEC3DQ96AK3 386 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SGTBQ96EQ0 304 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 MAELQ96JY0 434 aaKnown RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 DDOQ99489 341 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SORT1Q99523 831 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 ECSITQ9BQ95 431 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 DCTN5Q9BTE1 182 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 HCAR1Q9BXC0 346 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 CDCA4Q9BXL8 241 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 QTRT1Q9BXR0 403 aaKnown RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 GPR61Q9BZJ8 451 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 PRSS22Q9GZN4 317 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 C20orf27Q9GZN8 174 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SLC22A4Q9H015 551 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 PAIP1Q9H074 479 aaKnown RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 TMEM38AQ9H6F2 299 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 WDR55Q9H6Y2 383 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 MEPEQ9NQ76 525 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SIRT7Q9NRC8 400 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 C20orf141Q9NUB4 165 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 UFSP2Q9NUQ7 469 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 THAP1Q9NVV9 213 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 HAO1Q9UJM8 370 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SLC7A7Q9UM01 511 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 AURKCQ9UQB9 309 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 ANGPT4Q9Y264 503 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 NOP16Q9Y3C1 178 aaKnown RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 GMEB1Q9Y692 573 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 LCE6AA0A183 80 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 HTR3EA5X5Y0 456 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 DPPA5A6NC42 116 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 OR6C6A6NF89 314 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 TRPC5OSA6NMA1 111 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 M0QX08 132 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 NDUFB3O43676 98 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 ANGPTL7O43827 346 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 AHCYL1O43865 530 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 TYROBPO43914 113 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 FCN3O75636 299 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 LHBP01229 141 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 PAICSP22234 425 aaKnown RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 AQP1P29972 269 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 RPL4P36578 427 aaKnown RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 RBM34P42696 430 aaKnown RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 LSM6P62312 80 aaKnown RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 MZT1Q08AG7 82 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 STX3Q13277 289 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 MICBQ29980 383 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 LRRC75BQ2VPJ9 315 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 CCDC92Q53HC0 331 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 PRAMEF6Q5VXH4 476 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 TEX36Q5VZQ5 186 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 SLC36A1Q7Z2H8 476 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 RBM45Q8IUH3 476 aaKnown RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 ARHGAP24Q8N264 748 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 PNKDQ8N490 385 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 BHLHE23Q8NDY6 225 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 SDR9C7Q8NEX9 313 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 OR51G2Q8NGK0 314 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms