RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	IGHV3-13	P01766	116 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	CSTB	P04080	98 aa	Known RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	HLA-DPB1	P04440	258 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	LYN	P07948	512 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	ACSM4	P0C7M7	580 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	COX5B	P10606	129 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF250	P15622	560 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	USF1	P22415	310 aa	Predicted RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	EPHA2	P29317	976 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	RBMX	P38159	391 aa	Known RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	GPR6	P46095	362 aa	Predicted RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	CX3CR1	P49238	355 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	EVX1	P49640	407 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	RGS6	P49758	472 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	PPOX	P50336	477 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	CDC42	P60953	191 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	GRB2	P62993	217 aa	Known RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	PPP2R2B	Q00005	443 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	BLMH	Q13867	455 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	RCN1	Q15293	331 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR8G1	Q15617	311 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	TRIP10	Q15642	601 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	ODF4	Q2M2E3	257 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	HFE	Q30201	348 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	AVPI1	Q5T686	147 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	ATPAF1	Q5TC12	328 aa	Predicted RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	LPCAT4	Q643R3	524 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	KDM4D	Q6B0I6	523 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	LRRN1	Q6UXK5	716 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	PGAP1	Q75T13	922 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC16A9	Q7RTY1	509 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	C1orf174	Q8IYL3	243 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	YIPF7	Q8N8F6	280 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF540	Q8NDQ6	660 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR10H4	Q8NGA5	316 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR51G2	Q8NGK0	314 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR13G1	Q8NGZ3	307 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR2AE1	Q8NHA4	323 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	PRSS3P2	Q8NHM4	247 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	FAM81A	Q8TBF8	368 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	TMEM163	Q8TC26	289 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	CYGB	Q8WWM9	190 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	RDH5	Q92781	318 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	HAVCR1	Q96D42	359 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	DUS3L	Q96G46	650 aa	Known RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF799	Q96GE5	643 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	DDO	Q99489	341 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	COQ7	Q99807	217 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC29A1	Q99808	456 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	APOL4	Q9BPW4	351 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	TM2D2	Q9BX73	214 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	NMNAT2	Q9BZQ4	307 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	SP140L	Q9H930	580 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	LPAR2	Q9HBW0	351 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC25A19	Q9HC21	320 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	CYSLTR2	Q9NS75	346 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	UFSP2	Q9NUQ7	469 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	CLN6	Q9NWW5	311 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	UBAP1	Q9NZ09	502 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	AASS	Q9UDR5	926 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	PURG	Q9UJV8	347 aa	Known RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	COMMD3-BMI1	R4GMX3	469 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	TEP1	Q99973	2627 aa	Known RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	ANKRD30BL	A7E2S9	258 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF878	C9JN71	531 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288		F5H5P2	479 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	TGFA	P01135	160 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	IGHV1-46	P01743	117 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	APOC1	P02654	83 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	HEXA	P06865	529 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	CSF3	P09919	207 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	PSKH1	P11801	424 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	IRF2	P14316	349 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	ANPEP	P15144	967 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	PAX1	P15863	534 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC25A16	P16260	332 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	SELE	P16581	610 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	CA6	P23280	308 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	NR4A2	P43354	598 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	ALDH3A2	P51648	485 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	RIDA	P52758	137 aa	Known RBP	3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	CDH15	P55291	814 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF121	P58317	390 aa	Predicted RBP	3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	GMFB	P60983	142 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	CXCR4	P61073	352 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	HIST1H3A	P68431	136 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	IL5RA	Q01344	420 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF92	Q03936	586 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF91	Q05481	1191 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	GK2	Q14410	553 aa	Predicted RBP	3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	RSPO1	Q2MKA7	263 aa	Predicted RBP	3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	PCGF3	Q3KNV8	242 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	SNAI3	Q3KNW1	292 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	SPRN	Q5BIV9	151 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC35D3	Q5M8T2	416 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	GLYATL3	Q5SZD4	288 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	HIST2H3PS2	Q5TEC6	136 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	LINC01590	Q5TEZ4	76 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLX4IP	Q5VYV7	408 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	MORN5	Q5VZ52	161 aa		3.93	□□□□□ -1.78

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