RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 C20orf85Q9H1P6 137 aa7.19□□□□□ -1.26
ATXN3-235ENST00000556082 OR51J1Q9H342 316 aa7.19□□□□□ -1.26
ATXN3-235ENST00000556082 KCNK15Q9H427 330 aa7.19□□□□□ -1.26
ATXN3-235ENST00000556082 NOX3Q9HBY0 568 aa7.19□□□□□ -1.26
ATXN3-235ENST00000556082 MYOZ1Q9NP98 299 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-235ENST00000556082 C19orf73Q9NVV2 129 aa7.19□□□□□ -1.26
ATXN3-235ENST00000556082 ING3Q9NXR8 418 aa7.19□□□□□ -1.26
ATXN3-235ENST00000556082 CLCF1Q9UBD9 225 aa7.19□□□□□ -1.26
ATXN3-235ENST00000556082 CSAG2Q9Y5P2 127 aa7.19□□□□□ -1.26
ATXN3-235ENST00000556082 NCOA6Q14686 2063 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-235ENST00000556082 PHF3Q92576 2039 aaKnown RBP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 TRAV6A0A075B6T7 132 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 OR14I1A6ND48 311 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 FOXI3A8MTJ6 420 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 SNRPGP15A8MWD9 76 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 IL18BPO95998 194 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 IGHV3-9P01782 118 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 PATE4P0C8F1 98 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 NAT1P18440 290 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 ACKR3P25106 362 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 STOMP27105 288 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 OR3A4PP47883 348 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 FUT6P51993 359 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 ZP1P60852 638 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 RPS27AP62979 156 aaKnown RBP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 PLP2Q04941 152 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 FAPQ12884 760 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 MAB21L1Q13394 359 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 TNK1Q13470 666 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 MEF2DQ14814 521 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 ZMYND11Q15326 602 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 CNN3Q15417 329 aaKnown RBP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 SF3B4Q15427 424 aaKnown RBP eCLIP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 RBMS2Q15434 407 aaKnown RBP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 KCNJ8Q15842 424 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 GFOD2Q3B7J2 385 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 MOGAT2Q3SYC2 334 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 ZFP69Q49AA0 526 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 METTL11BQ5VVY1 283 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 STEAP1BQ6NZ63 245 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 RPUSD3Q6P087 351 aaKnown RBP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 Q6ZS92 163 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 Q6ZTK2 550 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 ASCL5Q7RTU5 278 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 ZNF101Q8IZC7 436 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 GABRG1Q8N1C3 465 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 STEAP2Q8NFT2 490 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 OR56B1Q8NGI3 324 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 OR4C16Q8NGL9 310 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 OR1K1Q8NGR3 316 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 APOBEC3DQ96AK3 386 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 MRPS24Q96EL2 167 aaKnown RBP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 POM121L2Q96KW2 1035 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 GPER1Q99527 375 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 NKX3-1Q99801 234 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 SLC25A21Q9BQT8 299 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 MED28Q9H204 178 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 OPA3Q9H6K4 179 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 MRPL15Q9P015 296 aaKnown RBP7.18□□□□□ -1.26
ATXN3-235ENST00000556082 ANAPC10Q9UM13 185 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 PTPRBP23467 1997 aa7.18□□□□□ -1.26
ATXN3-235ENST00000556082 WDFY4Q6ZS81 3184 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 LOC100509620A0A075B734 347 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 ZNF816-ZNF321PA0A0X1KG74 233 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 ZNF736B4DX44 427 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-235ENST00000556082 AKR7A2O43488 359 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 ZNF780AO75290 641 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-235ENST00000556082 RAB3DO95716 219 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 CYB5AP00167 134 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 CST4P01036 141 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 NRASP01111 189 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 HLA-HP01893 362 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 C1QBP02746 253 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 SULT1A3P0DMM9 295 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 SULT1A4P0DMN0 295 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 GTF2F2P13984 249 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 HIST1H1DP16402 221 aaKnown RBP7.17□□□□□ -1.26
ATXN3-235ENST00000556082 ERP29P30040 261 aaKnown RBP7.17□□□□□ -1.26
ATXN3-235ENST00000556082 CBX5P45973 191 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 FOXG1P55316 489 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-235ENST00000556082 MTCP1P56278 107 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 RAB1AP62820 205 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 TGFBR3Q03167 851 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 ZNF92Q03936 586 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 ZNF169Q14929 603 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-235ENST00000556082 C3AR1Q16581 482 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 ST3GAL2Q16842 350 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 LINC00303Q3SY05 128 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 RTL6Q6ICC9 239 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 OR2A2Q6IF42 318 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 GLDNQ6ZMI3 551 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-235ENST00000556082 ZNF782Q6ZMW2 699 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-235ENST00000556082 LHFPL2Q6ZUX7 228 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 SLC36A1Q7Z2H8 476 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 RNF144BQ7Z419 303 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 NOXA1Q86UR1 476 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 ZSCAN4Q8NAM6 433 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-235ENST00000556082 ACBD4Q8NC06 268 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 CHST4Q8NCG5 386 aa7.17□□□□□ -1.26
ATXN3-235ENST00000556082 TMEM104Q8NE00 496 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms