RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 MAPRE2Q15555 327 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 SPESP1Q6UW49 350 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 OR2M7Q8NG81 312 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 OR13C2Q8NGS9 318 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 TRIB3Q96RU7 358 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 API5Q9BZZ5 524 aaKnown RBP0.7□□□□□ -2.3
SNX6-204ENST00000555541 FANCEQ9HB96 536 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 HEBP1Q9NRV9 189 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 PITPNC1Q9UKF7 332 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 A0A1B0GU33 70 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 HEATR9A2RTY3 570 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 HUS1O60921 280 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 CD160O95971 181 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 PTMAP06454 111 aaKnown RBP0.69□□□□□ -2.3
SNX6-204ENST00000555541 MYL2P10916 166 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 OR1Q1Q15612 314 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 ANKDD1AQ495B1 522 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 TTC19Q6DKK2 380 aaPredicted RBP0.69□□□□□ -2.3
SNX6-204ENST00000555541 Q6ZQT7 251 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 RGS9BPQ6ZS82 235 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 DNAAF3Q8N9W5 541 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 Q8NAQ8 132 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 FAM57AQ8TBR7 257 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 DYNLL2Q96FJ2 89 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 MRPL48Q96GC5 212 aaKnown RBP0.69□□□□□ -2.3
SNX6-204ENST00000555541 FAM19A4Q96LR4 140 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 XPO6Q96QU8 1125 aaKnown RBP0.69□□□□□ -2.3
SNX6-204ENST00000555541 CALN1Q9BXU9 219 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 CYP3A43Q9HB55 503 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 ZNF286AQ9HBT8 521 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 TREX1Q9NSU2 369 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 STRCP1A6NGW2 1772 aa0.69□□□□□ -2.3
SNX6-204ENST00000555541 ELP1O95163 1332 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 IGKV1D-43A0A0B4J1Z2 117 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 IGKV2-29A2NJV5 120 aaPredicted RBP0.68□□□□□ -2.3
SNX6-204ENST00000555541 ERI3O43414 337 aaKnown RBP0.68□□□□□ -2.3
SNX6-204ENST00000555541 SLC19A2O60779 497 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 CTNSO60931 367 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 SEC11BP0C7V7 166 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 EIF2S2P20042 333 aaKnown RBP0.68□□□□□ -2.3
SNX6-204ENST00000555541 RAB5AP20339 215 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 TEAD1P28347 426 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 TUFMP49411 452 aaKnown RBP0.68□□□□□ -2.3
SNX6-204ENST00000555541 KRTAP10-4P60372 401 aaPredicted RBP0.68□□□□□ -2.3
SNX6-204ENST00000555541 GRB2P62993 217 aaKnown RBP0.68□□□□□ -2.3
SNX6-204ENST00000555541 ZNF33AQ06730 810 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 INCA1Q0VD86 236 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 TRDNQ13061 729 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 DHRS2Q13268 280 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 ENDOGQ14249 297 aaKnown RBP0.68□□□□□ -2.3
SNX6-204ENST00000555541 HSDL1Q3SXM5 330 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 STEAP4Q687X5 459 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 C3orf22Q8N5N4 141 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 TTC29Q8NA56 475 aaPredicted RBP0.68□□□□□ -2.3
SNX6-204ENST00000555541 SLC38A4Q969I6 547 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 FBXO32Q969P5 355 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 ISG20Q96AZ6 181 aaKnown RBP0.68□□□□□ -2.3
SNX6-204ENST00000555541 RAD51AP1Q96B01 352 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 FXYD5Q96DB9 178 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 SMARCD1Q96GM5 515 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 RDH12Q96NR8 316 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 GPR21Q99679 349 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 PKIBQ9C010 78 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 TUBA4BQ9H853 241 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 TMEM38BQ9NVV0 291 aa0.68□□□□□ -2.3
SNX6-204ENST00000555541 RCL1Q9Y2P8 373 aaKnown RBP0.68□□□□□ -2.3
SNX6-204ENST00000555541 TSPAN11A1L157 253 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 C9JVG2 144 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 CXorf1O96002 111 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 OXTP01178 125 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 TAGLN2P37802 199 aaKnown RBP0.67□□□□□ -2.3
SNX6-204ENST00000555541 RFC3P40938 356 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 SERPINB8P50452 374 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 ACTR3P61158 418 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 WDR82Q6UXN9 313 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 FAM228AQ86W67 206 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 BPIFB6Q8NFQ5 453 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 RAB1CQ92928 201 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 TXNDC17Q9BRA2 123 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 UCK2Q9BZX2 261 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 MRPL16Q9NX20 251 aaKnown RBP0.67□□□□□ -2.3
SNX6-204ENST00000555541 NOTCH1P46531 2555 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 JCADQ9P266 1359 aa0.67□□□□□ -2.3
SNX6-204ENST00000555541 ZNF729A6NN14 1252 aaPredicted RBP0.66□□□□□ -2.3
SNX6-204ENST00000555541 TRGV3P03979 118 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 CLTAP09496 248 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 SLC6A1P30531 599 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 GNRHRP30968 328 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 OR2B8PP59922 312 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 RPS15AP62244 130 aaKnown RBP0.66□□□□□ -2.3
SNX6-204ENST00000555541 LINC00303Q3SY05 128 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 CCDC183Q5T5S1 534 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 NANOGNBQ7Z5D8 188 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 RAB43Q86YS6 212 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 ITPRIPQ8IWB1 547 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 WDR31Q8NA23 367 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 OR10D4PQ8NGN7 298 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 OR1S1Q8NH92 325 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 SLC7A5P2Q9GIP4 190 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 NT5C3AQ9H0P0 336 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms