RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 CYTL1Q9NRR1 136 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 OR51B2Q9Y5P1 312 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 A0A0B4J2E0 115 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 OR5H1A6NKK0 313 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 RFXANKO14593 260 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 TAAR5O14804 337 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 ZNF207O43670 478 aaKnown RBP3.24□□□□□ -1.89
VRK1-205ENST00000555402 GMDSO60547 372 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 SCN2BO60939 215 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 THRAP10827 490 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 ME2P23368 584 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 CD40LGP29965 261 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 APLNRP35414 380 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 PCK1P35558 622 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 CXCL12P48061 93 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 UBE2E1P51965 193 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 SLC35B1P78383 322 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 RPL18AQ02543 176 aaKnown RBP3.24□□□□□ -1.89
VRK1-205ENST00000555402 PMS2P3Q13401 168 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 EIF4EBP2Q13542 120 aaPredicted RBP3.24□□□□□ -1.89
VRK1-205ENST00000555402 OR1Q1Q15612 314 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 ATP6V1FQ16864 119 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 ABCA11PQ4W5N1 156 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 Q5W150 140 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 Q6ZSR6 202 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 PID1Q7Z2X4 250 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 KRT222Q8N1A0 295 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 C17orf78Q8N4C9 275 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 ZNF645Q8N7E2 425 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 TTLQ8NG68 377 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 OR7G1Q8NGA0 311 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 LINC01560Q8TB33 94 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 DCAKDQ8WVC6 231 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 RXFP2Q8WXD0 754 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 TNFRSF14Q92956 283 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 TMEM159Q96B96 161 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 UBE2E2Q96LR5 201 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 RDH12Q96NR8 316 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 ALS2CR12Q96Q35 445 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 NSRP1Q9H0G5 558 aaKnown RBP3.24□□□□□ -1.89
VRK1-205ENST00000555402 SIRT7Q9NRC8 400 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 C8orf17Q9NRJ1 99 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 SDHAF3Q9NRP4 125 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 TREX1Q9NSU2 369 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 RHBDL2Q9NX52 303 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 MS4A12Q9NXJ0 267 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 EURLQ9NYK6 297 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 NKIRAS1Q9NYS0 192 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 ZNF257Q9Y2Q1 563 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 RFNGQ9Y644 331 aa3.24□□□□□ -1.89
VRK1-205ENST00000555402 NUP214P35658 2090 aaPredicted RBP3.23□□□□□ -1.89
VRK1-205ENST00000555402 IGKV1-27A0A075B6S5 117 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 C1orf232A0A0U1RR37 186 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 A0A1B0GW15 77 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 MANBAO00462 879 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 TOR1AO14656 332 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 UPK1BO75841 260 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 TTC4O95801 387 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 IGHV3-11P01762 117 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 HLA-DQB1P01920 261 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 MT-ND4P03905 459 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 LINC00869P0C866 280 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 HSPD1P10809 573 aaKnown RBP3.23□□□□□ -1.89
VRK1-205ENST00000555402 ST3GAL4Q11206 333 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 EIF4EBP1Q13541 118 aaPredicted RBP3.23□□□□□ -1.89
VRK1-205ENST00000555402 MAPRE2Q15555 327 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 PSG3Q16557 428 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 C5orf47Q569G3 176 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 TNS2Q63HR2 1409 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 OR9A2Q8NGT5 310 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 OR10Z1Q8NGY1 313 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 ZNF461Q8TAF7 563 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 GTF2H4Q92759 462 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 CENPNQ96H22 339 aaPredicted RBP3.23□□□□□ -1.89
VRK1-205ENST00000555402 ZNF514Q96K75 400 aaPredicted RBP3.23□□□□□ -1.89
VRK1-205ENST00000555402 OR4K3Q96R72 315 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 GABRG3Q99928 467 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 EMC6Q9BV81 110 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 ZNF442Q9H7R0 627 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 EXOSC4Q9NPD3 245 aaKnown RBP3.23□□□□□ -1.89
VRK1-205ENST00000555402 FBXO6Q9NRD1 293 aaPredicted RBP3.23□□□□□ -1.89
VRK1-205ENST00000555402 NECAP2Q9NVZ3 263 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 IL20Q9NYY1 176 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 CBY1Q9Y3M2 126 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 JCADQ9P266 1359 aa3.23□□□□□ -1.89
VRK1-205ENST00000555402 AQRO60306 1485 aaKnown RBP eCLIP3.22□□□□□ -1.891e-6■■□□□ 11.4
VRK1-205ENST00000555402 C7orf66A4D0T2 115 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 H7C2Y5 167 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 GOLGA8RI6L899 631 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 MYL12BO14950 172 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 CCNKO75909 580 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 MUC1P15941 1255 aaPredicted RBP3.22□□□□□ -1.89
VRK1-205ENST00000555402 IL1RNP18510 177 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 PSMB6P28072 239 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 LOXP28300 417 aaPredicted RBP3.22□□□□□ -1.89
VRK1-205ENST00000555402 HTR2CP28335 458 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 S100A5P33763 92 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 OR2B6P58173 313 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 LINC00315P59091 139 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 SLC35A1P78382 337 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms