RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CDONQ4KMG0 1287 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 OGFRL1Q5TC84 451 aaPredicted RBP10.13□□□□□ -0.79
SRP54-206ENST00000555317 ZNF691Q5VV52 312 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 BTNL3Q6UXE8 466 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 WDR82Q6UXN9 313 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 TECTBQ96PL2 329 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 MRI1Q9BV20 369 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 C7orf69Q9H7B7 122 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 PPP1R3EQ9H7J1 279 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 ERVK-18Q9QC07 812 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 DNAJB11Q9UBS4 358 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 IGHV3OR15-7A0A075B7D8 119 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 PPIAL4CA0A0B4J2A2 164 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 LOC107986453A0A1B0GWG9 222 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 A8MXK9 166 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 H3BSH0 61 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 J3QRE1 110 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 DLGAP1O14490 977 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 CASQ2O14958 399 aaPredicted RBP10.12□□□□□ -0.79
SRP54-206ENST00000555317 ADAM20O43506 726 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 GATBO75879 557 aaKnown RBP10.12□□□□□ -0.79
SRP54-206ENST00000555317 CLIC3O95833 236 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 SERPINA3P01011 423 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 WNT2P09544 360 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 MUC1P15941 1255 aaPredicted RBP10.12□□□□□ -0.79
SRP54-206ENST00000555317 ZNF20P17024 532 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 ZFP36P26651 326 aaKnown RBP10.12□□□□□ -0.79
SRP54-206ENST00000555317 NPY4RP50391 375 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 OR12D2P58182 307 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 GMFBP60983 142 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 SEC61A1P61619 476 aaKnown RBP10.12□□□□□ -0.79
SRP54-206ENST00000555317 MRPL28Q13084 256 aaKnown RBP10.12□□□□□ -0.79
SRP54-206ENST00000555317 MED21Q13503 144 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 GALEQ14376 348 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 WDR38Q5JTN6 314 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 TMEM244Q5VVB8 128 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 WDR86Q86TI4 376 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 LHFPL3Q86UP9 236 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 PRIMA1Q86XR5 153 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 C8orf59Q8N0T1 100 aaPredicted RBP10.12□□□□□ -0.79
SRP54-206ENST00000555317 GCSAMQ8N6F7 178 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 SCCPDHQ8NBX0 429 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 OR5A2Q8NGI9 324 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 OR10Z1Q8NGY1 313 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 OR2G2Q8NGZ5 317 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 HPSE2Q8WWQ2 592 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 RPL3LQ92901 407 aaKnown RBP10.12□□□□□ -0.79
SRP54-206ENST00000555317 C4orf36Q96KX1 117 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 TLNRD1Q9H1K6 362 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 METTL17Q9H7H0 456 aaPredicted RBP10.12□□□□□ -0.79
SRP54-206ENST00000555317 GPR173Q9NS66 373 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 SLC7A11Q9UPY5 501 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 V9GYS6 101 aa10.12□□□□□ -0.79
SRP54-206ENST00000555317 A0A1B0GTI1 187 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 ANKRD61A6NGH8 418 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 NKX6-3A6NJ46 265 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 H0YAE9 185 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 IGHA1P01876 353 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 GYPAP02724 150 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 OCM2P0CE71 109 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 OCMP0CE72 109 aaPredicted RBP10.11□□□□□ -0.79
SRP54-206ENST00000555317 MYL12AP19105 171 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 CCL1P22362 96 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 CAPGP40121 348 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 ISL1P61371 349 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 SLC34A1Q06495 639 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 ARMCX4Q5H9R4 360 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 TEX36Q5VZQ5 186 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 CD276Q5ZPR3 534 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 HAGHLQ6PII5 290 aaPredicted RBP10.11□□□□□ -0.79
SRP54-206ENST00000555317 FAM90A1Q86YD7 464 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 ZNF573Q86YE8 665 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 C11orf53Q8IXP5 236 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 SYS1Q8N2H4 156 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 PRSS35Q8N3Z0 413 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 ZNF676Q8N7Q3 588 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 OR52I1Q8NGK6 324 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 OR14K1Q8NGZ2 314 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 ZNF671Q8TAW3 534 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 CNIH3Q8TBE1 160 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 NANPQ8TBE9 248 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 HAVCR2Q8TDQ0 301 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 APH1BQ8WW43 257 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 C12orf43Q96C57 262 aaKnown RBP10.11□□□□□ -0.79
SRP54-206ENST00000555317 VCX3BQ9H321 246 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 CHCHD3Q9NX63 227 aaKnown RBP10.11□□□□□ -0.79
SRP54-206ENST00000555317 ERVK13-1Q9NX77 482 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 MYRFQ9Y2G1 1151 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 HSPE1-MOB4S4R3N1 261 aa10.11□□□□□ -0.79
SRP54-206ENST00000555317 LOC105371242A0A075B767 164 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 A6NIN4 97 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 KIAA1324LA8MWY0 1029 aaPredicted RBP10.1□□□□□ -0.79
SRP54-206ENST00000555317 SRRM5B3KS81 715 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 TMPRSS2O15393 492 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 AKR7A2O43488 359 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 WBP4O75554 376 aaKnown RBP10.1□□□□□ -0.79
SRP54-206ENST00000555317 LHBP01229 141 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 RPSAP08865 295 aaKnown RBP10.1□□□□□ -0.79
SRP54-206ENST00000555317 CCDC159P0C7I6 412 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 EGR1P18146 543 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms