RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ABCB9Q9NP78 766 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 PURGQ9UJV8 347 aaKnown RBP9.18□□□□□ -0.94
TDP1-211ENST00000555178 POU2F3Q9UKI9 436 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 IQCF6A8MYZ5 107 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 TIMM8AO60220 97 aaPredicted RBP9.17□□□□□ -0.94
TDP1-211ENST00000555178 HPGDSO60760 199 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 OR4A8P0C604 315 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 ZNF250P15622 560 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 ZNF93P35789 620 aaPredicted RBP9.17□□□□□ -0.94
TDP1-211ENST00000555178 GPM6AP51674 278 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 LSAMPQ13449 338 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 KISS1Q15726 138 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 ZNF718Q3SXZ3 478 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 MBNL2Q5VZF2 373 aaKnown RBP9.17□□□□□ -0.94
TDP1-211ENST00000555178 OR10K2Q6IF99 312 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 FAM166AQ6J272 317 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 C1QL2Q7Z5L3 287 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 ANGPTL5Q86XS5 388 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 CCDC54Q8NEL0 328 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 OR51D1Q8NGF3 324 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 OR6Q1Q8NGQ2 317 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 SLC25A28Q96A46 364 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 C10orf35Q96D05 121 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 ITPKCQ96DU7 683 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 TSC22D3Q99576 134 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 NGBQ9NPG2 151 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 CISD1Q9NZ45 108 aaKnown RBP9.17□□□□□ -0.94
TDP1-211ENST00000555178 ANKRD30BLA7E2S9 258 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 SLC17A2O00624 439 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 MLNRO43193 412 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 CST4P01036 141 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 GCH1P30793 250 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 ALDH3B1P43353 468 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 KRTAP10-9P60411 292 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 DAZAP2Q15038 168 aaPredicted RBP9.17□□□□□ -0.94
TDP1-211ENST00000555178 ZNF672Q499Z4 452 aaPredicted RBP9.17□□□□□ -0.94
TDP1-211ENST00000555178 GLT8D1Q68CQ7 371 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 CALHM1Q8IU99 346 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 ZDHHC23Q8IYP9 409 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 NKAIN3Q8N8D7 197 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 CSNK2A3Q8NEV1 391 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 NUP37Q8NFH4 326 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 SYNPRQ8TBG9 265 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 CYYR1Q96J86 154 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 LIME1Q9H400 295 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 METTL17Q9H7H0 456 aaPredicted RBP9.17□□□□□ -0.94
TDP1-211ENST00000555178 OR5V1Q9UGF6 321 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 DYSFO75923 2080 aa9.17□□□□□ -0.94
TDP1-211ENST00000555178 A0A1W2PP11 408 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 FAM221AA4D161 298 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 ZSCAN5BA6NJL1 495 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 SPRY1O43609 319 aaPredicted RBP9.16□□□□□ -0.94
TDP1-211ENST00000555178 ANGPTL7O43827 346 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 CD8AP01732 235 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 EIF4EP06730 217 aaKnown RBP9.16□□□□□ -0.94
TDP1-211ENST00000555178 PRF1P14222 555 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 PAX7P23759 505 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 HTR2CP28335 458 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 EFNB2P52799 333 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 RAB11BQ15907 218 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 C1QTNF12Q5T7M4 302 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 UNQ6126/PRO20091Q6UXV3 157 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 WDR86Q86TI4 376 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 BIVMQ86UB2 503 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 SAMD12Q8N8I0 201 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 ZNF671Q8TAW3 534 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 MRPL24Q96A35 216 aaKnown RBP9.16□□□□□ -0.94
TDP1-211ENST00000555178 GPER1Q99527 375 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 GAL3ST1Q99999 423 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 SPOCK3Q9BQ16 436 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 ADAT1Q9BUB4 502 aaKnown RBP9.16□□□□□ -0.94
TDP1-211ENST00000555178 MMP27Q9H306 513 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 STEAP1Q9UHE8 339 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 SPEF1Q9Y4P9 236 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 IGLV3-9A0A075B6K5 115 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 A0A075B6Q4 140 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 SOD3P08294 240 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 CD37P11049 281 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 NAT2P11245 290 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 BMP4P12644 408 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 KITLGP21583 273 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 POU3F4P49335 361 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 MTCP1P56278 107 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 KLF3P57682 345 aaPredicted RBP9.16□□□□□ -0.94
TDP1-211ENST00000555178 CNN3Q15417 329 aaKnown RBP9.16□□□□□ -0.94
TDP1-211ENST00000555178 ZBTB37Q5TC79 503 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 ZNF787Q6DD87 383 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 TGIF2LYQ8IUE0 185 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 OR10K1Q8NGX5 313 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 OR5P3Q8WZ94 311 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 AP3S1Q92572 193 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 FAM46BQ96A09 425 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 SLC25A38Q96DW6 304 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 BORCS8Q96FH0 119 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 C1orf147Q96MC9 270 aaPredicted RBP9.16□□□□□ -0.94
TDP1-211ENST00000555178 MRPL15Q9P015 296 aaKnown RBP9.16□□□□□ -0.94
TDP1-211ENST00000555178 TAAR3PQ9P1P4 343 aa9.16□□□□□ -0.94
TDP1-211ENST00000555178 MEGF11A6BM72 1044 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 ZNF732B4DXR9 585 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 F5H5P2 479 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms