RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 B3GAT1Q9P2W7 334 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 FBLN5Q9UBX5 448 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 CYB5R1Q9UHQ9 305 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 ING1Q9UK53 422 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-216ENST00000554975 SLC22A13Q9Y226 551 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 MALRD1Q5VYJ5 2156 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 DYSFO75923 2080 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 TMEM272A0A1B0GTI8 110 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 ARPC1BO15143 372 aaKnown RBP9.67□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF780AO75290 641 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-216ENST00000554975 GPANK1O95872 356 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 PNPP00491 289 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 ITGA5P08648 1049 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 UBBP0CG47 229 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 HLA-DOBP13765 273 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 GTF2F2P13984 249 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 RAB3AP20336 220 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 IL11P20809 199 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 CCKARP32238 428 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 GNALP38405 381 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 CSNK1A1P48729 337 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 VEGFCP49767 419 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 FAM27E3Q08E93 113 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 SLC25A47Q6Q0C1 308 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 C20orf204Q6ZNR8 217 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 TMPPEQ6ZT21 453 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 C22orf34Q6ZV56 151 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 CHMP1BQ7LBR1 199 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 PRSS45Q7RTY3 260 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 LINC00346Q8IVM7 164 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 GCNT2Q8N0V5 402 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 C9orf62Q8N4C0 152 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 JAGN1Q8N5M9 183 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 DTX3Q8N9I9 347 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 TMEM229BQ8NBD8 167 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 OR11H7Q8NGC8 314 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 OR51A4Q8NGJ6 313 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 OR5M1Q8NGP8 315 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 GPX8Q8TED1 209 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 ORAI1Q96D31 301 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 CPNE2Q96FN4 548 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-216ENST00000554975 SLC25A21Q9BQT8 299 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-216ENST00000554975 ATG5Q9H1Y0 275 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 NOX3Q9HBY0 568 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 TMEM138Q9NPI0 162 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 YAE1D1Q9NRH1 226 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 CENPMQ9NSP4 180 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 FAM206AQ9NX38 181 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 GDF2Q9UK05 429 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-216ENST00000554975 RAB22AQ9UL26 194 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 HSPB11Q9Y547 144 aa9.67□□□□□ -0.86
SHMT2-216ENST00000554975 TRAV18A0A075B6X5 111 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 A8MXE2 369 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 FABP7O15540 132 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 ZIC3O60481 467 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 RGS11O94810 467 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 WNT11O96014 354 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 CYB5AP00167 134 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 ALDOBP05062 364 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 ACSM4P0C7M7 580 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 PAX1P15863 534 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 MSR1P21757 451 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 CRYGSP22914 178 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF84P51523 738 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 P2RY4P51582 365 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF133P52736 654 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-216ENST00000554975 GFRA1P56159 465 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 ARL6IP1Q15041 203 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 ETFDHQ16134 617 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 ODF4Q2M2E3 257 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 C2orf76Q3KRA6 126 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 C10orf128Q5T292 105 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF626Q68DY1 528 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 LRFN4Q6PJG9 635 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 DOK3Q7L591 496 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 P4HA3Q7Z4N8 544 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 OR1M1Q8NGA1 313 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 OR5D14Q8NGL3 314 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 OR4C16Q8NGL9 310 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 C10orf35Q96D05 121 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 DNAJA3Q96EY1 480 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 SF3B5Q9BWJ5 86 aaKnown RBP9.66□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF436Q9C0F3 470 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-216ENST00000554975 PBOV1Q9GZY1 135 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 CALHM2Q9HA72 323 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 MYOZ1Q9NP98 299 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF701Q9NV72 531 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-216ENST00000554975 NKIRAS2Q9NYR9 191 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 NDRG3Q9UGV2 375 aa9.66□□□□□ -0.86
SHMT2-216ENST00000554975 MRPS18CQ9Y3D5 142 aaKnown RBP9.66□□□□□ -0.86
SHMT2-216ENST00000554975 FREM1Q5H8C1 2179 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 CIB4A0PJX0 185 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 OR2M5A3KFT3 312 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 SHISA8B8ZZ34 492 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 DISC1C4P0D8 188 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 LDLRAD4O15165 306 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 GMDSO60547 372 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 ICMTO60725 284 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 IFNA7P01567 189 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 TTRP02766 147 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms