RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TMEM101Q96IK0 257 aa3.32□□□□□ -1.88
SCFD1-211ENST00000554437 MBOAT7Q96N66 472 aa3.32□□□□□ -1.88
SCFD1-211ENST00000554437 ARHGDIGQ99819 225 aa3.32□□□□□ -1.88
SCFD1-211ENST00000554437 PRORYQ9H606 182 aa3.32□□□□□ -1.88
SCFD1-211ENST00000554437 SH2D2AQ9NP31 389 aa3.32□□□□□ -1.88
SCFD1-211ENST00000554437 FBXO8Q9NRD0 319 aa3.32□□□□□ -1.88
SCFD1-211ENST00000554437 MTCH2Q9Y6C9 303 aa3.32□□□□□ -1.88
SCFD1-211ENST00000554437 KCNE3Q9Y6H6 103 aa3.32□□□□□ -1.88
SCFD1-211ENST00000554437 PLEKHG1Q9ULL1 1385 aa3.32□□□□□ -1.88
SCFD1-211ENST00000554437 TRAV39A0A0B4J263 110 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 IGHV2OR16-5A0A0B4J2B6 119 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 FAM240AA0A1B0GVK7 77 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 SLC5A10A0PJK1 596 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 OR2AT4A6NND4 320 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 F5H768 121 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 TNFRSF11BO00300 401 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 TGOLN2O43493 480 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 TTC4O95801 387 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 CELP19835 753 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 F8A1P23610 371 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 CCNE1P24864 410 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 F2RP25116 425 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 PFN2P35080 140 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 CXCR4P61073 352 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 RAB14P61106 215 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 ARF6P62330 175 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 POLR2GP62487 172 aaKnown RBP eCLIP3.31□□□□□ -1.88
SCFD1-211ENST00000554437 SLC35A1P78382 337 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 CYP24A1Q07973 514 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 MLLT11Q13015 90 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-211ENST00000554437 NAB1Q13506 487 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 PAGE3Q5JUK9 113 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 UNQ9370/PRO34162Q6UXP9 181 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 ZNF620Q6ZNG0 422 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 TIFABQ6ZNK6 161 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 SLC30A8Q8IWU4 369 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 C10orf67Q8IYJ2 551 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 ZFP82Q8N141 532 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 CHST4Q8NCG5 386 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 OR51S1Q8NGJ8 323 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 OR9G1Q8NH87 305 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 SYNPRQ8TBG9 265 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 TAAR1Q96RJ0 339 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 GPR22Q99680 433 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 C20orf144Q9BQM9 153 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 COA1Q9GZY4 146 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 OR51B6Q9H340 312 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 MFSD1Q9H3U5 465 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 XCL2Q9UBD3 114 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 GUCA1BQ9UMX6 200 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 UGT2A1Q9Y4X1 527 aa3.31□□□□□ -1.88
SCFD1-211ENST00000554437 NOTCH2Q04721 2471 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 SYCE1LA8MT33 242 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 E5RI56 91 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 H3BNH8 94 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 H7C1H1 209 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 DENRO43583 198 aaKnown RBP3.3□□□□□ -1.88
SCFD1-211ENST00000554437 SSNA1O43805 119 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 ASS1P00966 412 aaKnown RBP3.3□□□□□ -1.88
SCFD1-211ENST00000554437 RLN2P04090 185 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 CALB1P05937 261 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 UGT2B7P16662 529 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 ZNF17P17021 662 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 ATF6P18850 670 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 HTR1DP28221 377 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 GTF2H1P32780 548 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 PPICP45877 212 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 CAPZBP47756 277 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 HSPA13P48723 471 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 AP2S1P53680 142 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-211ENST00000554437 DLX1P56177 255 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 CLDN12P56749 244 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 ZNF763Q0D2J5 394 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 CDC20Q12834 499 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 ZNF266Q14584 549 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 C1orf100Q5SVJ3 147 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 C1orf146Q5VVC0 180 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 ANKRD22Q5VYY1 191 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 USP50Q70EL3 339 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-211ENST00000554437 OAFQ86UD1 273 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 SLC13A5Q86YT5 568 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-211ENST00000554437 C10orf107Q8IVU9 208 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 WDFY1Q8IWB7 410 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 STPG2Q8N412 459 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 SPICQ8N5J4 248 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 METTL13Q8N6R0 699 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 OR4K17Q8NGC6 315 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 OR10W1Q8NGF6 305 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 OR5B17Q8NGF7 314 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 ZFAND1Q8TCF1 268 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 ZFP90Q8TF47 636 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 HGDQ93099 445 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 SMIM19Q96E16 107 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 ZMYND19Q96E35 227 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-211ENST00000554437 PACRGQ96M98 296 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-211ENST00000554437 TMEM56Q96MV1 263 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 STACQ99469 402 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 POLR2J2Q9GZM3 115 aaKnown RBP3.3□□□□□ -1.88
SCFD1-211ENST00000554437 ARL6Q9H0F7 186 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 POLR2J3Q9H1A7 115 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms