RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 LRP12Q9Y561 859 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 TMEM14AQ9Y6G1 99 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 A0A0U1RQV5 110 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 A0A1W2PQ09 198 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 TIMM23O14925 209 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 AKR7A2O43488 359 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 GPR137BO60478 399 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 IGHV4-59P01825 116 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 ATP6V1B1P15313 513 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 NDUFB7P17568 137 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 ALOX5APP20292 161 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 GABRA2P47869 451 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 GPM6AP51674 278 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 GNG3P63215 75 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 CBX1P83916 185 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 ZNF829Q3KNS6 432 aaPredicted RBP10.5□□□□□ -0.73
LINC00643-202ENST00000553426 FAM76BQ5HYJ3 339 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 ASB17Q8WXJ9 295 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 SEH1LQ96EE3 360 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 WDR13Q9H1Z4 485 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 PPP1R3EQ9H7J1 279 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 SIRT7Q9NRC8 400 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 TVP23BQ9NYZ1 205 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 NLKQ9UBE8 527 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 RNF114Q9Y508 228 aa10.5□□□□□ -0.73
LINC00643-202ENST00000553426 PRKDCP78527 4128 aaKnown RBP10.5□□□□□ -0.73
LINC00643-202ENST00000553426 TGP01266 2768 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 A0A1B0GW55 424 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 OR2AT4A6NND4 320 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 ZNF732B4DXR9 585 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 M0QZ24 198 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 FKBP6O75344 327 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 ZNF254O75437 659 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 MTRF1O75570 445 aaKnown RBP10.49□□□□□ -0.73
LINC00643-202ENST00000553426 FCN3O75636 299 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 ACAA1P09110 424 aaPredicted RBP10.49□□□□□ -0.73
LINC00643-202ENST00000553426 DUX4L2P0CJ85 424 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 DUX4L3P0CJ86 424 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 DUX4L4P0CJ87 422 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 DUX4L5P0CJ88 424 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 DUX4L6P0CJ89 424 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 DUX4L7P0CJ90 424 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 PRKACGP22612 351 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 DCTDP32321 178 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 ACTR3P61158 418 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 ELF3P78545 371 aaPredicted RBP10.49□□□□□ -0.73
LINC00643-202ENST00000553426 RIPPLY1Q0D2K3 151 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 CEACAM21Q3KPI0 293 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 NCR3LG1Q68D85 454 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 DUX4L9Q6RFH8 374 aaPredicted RBP10.49□□□□□ -0.73
LINC00643-202ENST00000553426 ZNF788Q6ZQV5 615 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 C1orf122Q6ZSJ8 110 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 HS3ST5Q8IZT8 346 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 FGFRL1Q8N441 504 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 BBS1Q8NFJ9 593 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 ANGPTL6Q8NI99 470 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 C8orf46Q8TAG6 207 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 NRBF2Q96F24 287 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 LYZL4Q96KX0 146 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 TEAD3Q99594 435 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 METTL8Q9H825 291 aaKnown RBP10.49□□□□□ -0.73
LINC00643-202ENST00000553426 SLC25A19Q9HC21 320 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 PAPOLBQ9NRJ5 636 aaKnown RBP10.49□□□□□ -0.73
LINC00643-202ENST00000553426 H2AFY2Q9P0M6 372 aaPredicted RBP10.49□□□□□ -0.73
LINC00643-202ENST00000553426 DUX4Q9UBX2 424 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 IKZF2Q9UKS7 526 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 KLHDC2Q9Y2U9 406 aa10.49□□□□□ -0.73
LINC00643-202ENST00000553426 MEIOCA2RUB1 952 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 OR5B21A6NL26 309 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 M0R1W7 72 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 NPFFO15130 113 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 SIGLEC5O15389 551 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 MRPL3P09001 348 aaKnown RBP10.48□□□□□ -0.73
LINC00643-202ENST00000553426 SLC2A5P22732 501 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 RIDAP52758 137 aaKnown RBP10.48□□□□□ -0.73
LINC00643-202ENST00000553426 CAPZA1P52907 286 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 HCCSP53701 268 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 CRISP1P54107 249 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 CAV3P56539 151 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 RELBQ01201 579 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 CEP78Q5JTW2 689 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 ZBTB37Q5TC79 503 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 TMEM236Q5W0B7 351 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 DHRS7BQ6IAN0 325 aaPredicted RBP10.48□□□□□ -0.73
LINC00643-202ENST00000553426 TRPM8Q7Z2W7 1104 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 ZNF679Q8IYX0 411 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 OR5A2Q8NGI9 324 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 HPSE2Q8WWQ2 592 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 GAFA1Q96PS6 74 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 CNN2Q99439 309 aaKnown RBP10.48□□□□□ -0.73
LINC00643-202ENST00000553426 PBOV1Q9GZY1 135 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 GPR84Q9NQS5 396 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 ENPP5Q9UJA9 477 aa10.48□□□□□ -0.73
LINC00643-202ENST00000553426 TRBV23-1A0A0A0MS06 115 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 A0A1W2PPH5 198 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 H0YAE9 185 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 RNASEK-C17orf49H0YIS7 233 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 PSMD9O00233 223 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 SELLP14151 372 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms