RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 HPDP32754 393 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-217ENST00000553287 IDH3GP51553 393 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-217ENST00000553287 LCN2P80188 198 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CDK16Q00536 496 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 PUDPQ08623 228 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 ZP4Q12836 540 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 BAMBIQ13145 260 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 MAD2L1BPQ15013 274 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CCNJQ5T5M9 372 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CPTPQ5TA50 214 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 ASPHD2Q6ICH7 369 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CBLN3Q6UW01 205 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 OLIG3Q7RTU3 272 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 COMMD6Q7Z4G1 85 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CMC1Q7Z7K0 106 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 ADAMTSL2Q86TH1 951 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 LRP11Q86VZ4 500 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CNTN4Q8IWV2 1026 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 GTPBP8Q8N3Z3 284 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CDC26Q8NHZ8 85 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 TMEM37Q8WXS4 190 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 MARC2Q969Z3 335 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 TMIGD2Q96BF3 282 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 OR5B2Q96R09 309 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF184Q99676 751 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CAPS2Q9BXY5 557 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 EBPLQ9BY08 206 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 TBL1XR1Q9BZK7 514 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 EXOSC3Q9NQT5 275 aaKnown RBP3.02□□□□□ -1.93
ATXN3-217ENST00000553287 GLRX2Q9NS18 164 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CA10Q9NS85 328 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 GIN1Q9NXP7 522 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 MYEF2Q9P2K5 600 aaKnown RBP3.02□□□□□ -1.93
ATXN3-217ENST00000553287 OPTCQ9UBM4 332 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 MGAT4BQ9UQ53 548 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CFL2Q9Y281 166 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CACNG2Q9Y698 323 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 DNAH3Q8TD57 4116 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 TRBV7-9A0A0J9YWB2 115 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 GOLGA6L10A6NI86 522 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 OR7A17O14581 309 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 ARPC1BO15143 372 aaKnown RBP3.01□□□□□ -1.93
ATXN3-217ENST00000553287 PPIHO43447 177 aaKnown RBP3.01□□□□□ -1.93
ATXN3-217ENST00000553287 WISP3O95389 354 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-217ENST00000553287 H6PDO95479 791 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 OXSR1O95747 527 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-217ENST00000553287 PDYNP01213 254 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 MLNP12872 115 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 CCNA2P20248 432 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 ME2P23368 584 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 PRTN3P24158 256 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 GABRA3P34903 492 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 MAGEA6P43360 314 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 GPR6P46095 362 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF117Q03924 483 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 C17orf67Q0P5P2 114 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 EIF2B1Q14232 305 aaKnown RBP3.01□□□□□ -1.93
ATXN3-217ENST00000553287 SLC9A3R2Q15599 337 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 ZKSCAN8Q15776 578 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-217ENST00000553287 PRR4Q16378 134 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 ATP6AP1LQ52LC2 224 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF311Q5JNZ3 666 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 KLF17Q5JT82 389 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-217ENST00000553287 SPANXN3Q5MJ09 141 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 VAX1Q5SQQ9 334 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 TSPO2Q5TGU0 170 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 MEDAGQ5VYS4 303 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 FBXW9Q5XUX1 488 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 SULT1C3Q6IMI6 304 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 GOLGA7Q7Z5G4 137 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 RANBP3LQ86VV4 465 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-217ENST00000553287 MKXQ8IYA7 352 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF786Q8N393 782 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF540Q8NDQ6 660 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 OR51F2Q8NH61 342 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 ZFP90Q8TF47 636 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 UBE2E3Q969T4 207 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 FAM104AQ969W3 186 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 C5orf30Q96GV9 206 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 DOK1Q99704 481 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 CENPKQ9BS16 269 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 FRMD8P1Q9BZ68 369 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-217ENST00000553287 DERL2Q9GZP9 239 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 SLC5A7Q9GZV3 580 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 RACGAP1Q9H0H5 632 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 RAB1BQ9H0U4 201 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 SLC17A5Q9NRA2 495 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 MMP26Q9NRE1 261 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 SDHAF3Q9NRP4 125 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 PURGQ9UJV8 347 aaKnown RBP3.01□□□□□ -1.93
ATXN3-217ENST00000553287 GUCA1BQ9UMX6 200 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF780BQ9Y6R6 833 aa3.01□□□□□ -1.93
ATXN3-217ENST00000553287 IGLV3-32A0A0A0MS00 114 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 OR6C65A6NJZ3 312 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF716A6NP11 495 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 UPK1AO00322 258 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 LGI1O95970 557 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 CECR9P0C854 216 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 PPOXP50336 477 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 NCBP2P52298 156 aaKnown RBP eCLIP3□□□□□ -1.935e-7■■■■□ 25.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms