RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 NKX2-6A6NCS4 301 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 A6NDX4 124 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 KLRC4-KLRK1H3BQV0 150 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 PSPHP1O15172 72 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 UBDO15205 165 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 FABP7O15540 132 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 COCHO43405 550 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 SLC22A5O76082 557 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 PAX6P26367 422 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 GTF2H1P32780 548 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 PSMB2P49721 201 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 RGS19P49795 217 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 KRTAP10-9P60411 292 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 GNB2P62879 340 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 LAMTOR4Q0VGL1 99 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 PRSS8Q16651 343 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 OR10J3Q5JRS4 329 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 TMEM236Q5W0B7 351 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 ZNF429Q86V71 674 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 FUNDC1Q8IVP5 155 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 SLC34A3Q8N130 599 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 C11orf42Q8N5U0 333 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 Q8N9W7 124 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 ACBD4Q8NC06 268 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 PTX4Q96A99 478 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 TMEM159Q96B96 161 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 ZMYND19Q96E35 227 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-208ENST00000553278 SMARCD1Q96GM5 515 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 PAIP2Q9BPZ3 127 aaKnown RBP4.01□□□□□ -1.77
SCFD1-208ENST00000553278 CHAC1Q9BUX1 264 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 NXF2Q9GZY0 626 aaKnown RBP4.01□□□□□ -1.77
SCFD1-208ENST00000553278 DNAJC27Q9NZQ0 273 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 ZNFX1Q9P2E3 1918 aaKnown RBP4.01□□□□□ -1.77
SCFD1-208ENST00000553278 KIAA0232Q92628 1395 aa4.01□□□□□ -1.77
SCFD1-208ENST00000553278 ZNF608Q9ULD9 1512 aaPredicted RBP4□□□□□ -1.77
SCFD1-208ENST00000553278 ELP1O95163 1332 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 GTF3C1Q12789 2109 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 RSPH10B2B2RC85 870 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 MANBAO00462 879 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 RP2O75695 350 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 SLC25A27O95847 323 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 RSPH10BP0C881 870 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 AQP5P55064 265 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 TAS2R31P59538 309 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 CRADDP78560 199 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 EXOC3L4Q17RC7 722 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 C6orf99Q4VX62 202 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 UGT2A3Q6UWM9 527 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 FAM92BQ6ZTR7 304 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 MDP1Q86V88 176 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 GAPTQ8N292 157 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 NELFBQ8WX92 580 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 FLYWCH2Q96CP2 140 aaKnown RBP4□□□□□ -1.77
SCFD1-208ENST00000553278 CAMK2N2Q96S95 79 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 HBEGFQ99075 208 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 RBBP8Q99708 897 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 ZNF426Q9BUY5 554 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 SAMD10Q9BYL1 202 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 NOX3Q9HBY0 568 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 RBFOX1Q9NWB1 397 aaKnown RBP4□□□□□ -1.77
SCFD1-208ENST00000553278 IL17CQ9P0M4 197 aa4□□□□□ -1.77
SCFD1-208ENST00000553278 MAP3K15Q6ZN16 1313 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 IGLV1-50A0A075B6I6 118 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 IGHV5-51A0A0C4DH38 117 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 A0A1W2PRG6 482 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 ZNF233A6NK53 670 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 NDUFS5O43920 106 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 RAB36O95755 333 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 PSMB5P28074 263 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 POLR2IP36954 125 aaKnown RBP3.99□□□□□ -1.77
SCFD1-208ENST00000553278 RHOAP61586 193 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 PNOCQ13519 176 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 CEACAM21Q3KPI0 293 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 CDKL4Q5MAI5 379 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 MFSD14CQ5VZR4 134 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 OPN5Q6U736 354 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 CLEC18BQ6UXF7 455 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 TPGS1Q6ZTW0 290 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 PCP2Q8IVA1 136 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 LINC01555Q8NAE3 123 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 LFNGQ8NES3 379 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 OR6N1Q8NGY5 312 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 DYNC2LI1Q8TCX1 351 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 DCAKDQ8WVC6 231 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 FAM104AQ969W3 186 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 BMFQ96LC9 184 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 RILPQ96NA2 401 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 METTL26Q96S19 204 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 SPZ1Q9BXG8 430 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 SHCBP1LQ9BZQ2 653 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 SLC40A1Q9NP59 571 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 DIABLOQ9NR28 239 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 OR12D3Q9UGF7 316 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 FBXL3Q9UKT7 428 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 RAB22AQ9UL26 194 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 CACNG2Q9Y698 323 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 C2orf16Q68DN1 1984 aa3.99□□□□□ -1.77
SCFD1-208ENST00000553278 NPHP4O75161 1426 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-208ENST00000553278 IGHV3-64DA0A0J9YX35 117 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 KIR2DS1A0A191URI9 304 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms