RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 KLRD1Q13241 179 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 MAD2L1Q13257 205 aaPredicted RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 MAB21L1Q13394 359 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 MELKQ14680 651 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 C2orf76Q3KRA6 126 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF260Q3ZCT1 412 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 CLEC12AQ5QGZ9 265 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 C1orf94Q6P1W5 598 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 PTCHD4Q6ZW05 846 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 C16orf82Q7Z2V1 217 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 MAVSQ7Z434 540 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 DHDDSQ86SQ9 333 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 SERPINA11Q86U17 422 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF429Q86V71 674 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF695Q8IW36 515 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 RIMKLAQ8IXN7 391 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 C10orf111Q8N326 155 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 COMMD1Q8N668 190 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 KRTCAP2Q8N6L1 136 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF781Q8N8C0 355 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 OR8J2Q8NGG1 315 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 AGR3Q8TD06 166 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 C17orf50Q8WW18 174 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 SPRYD4Q8WW59 207 aaPredicted RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 H1FXQ92522 213 aaKnown RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 APOBEC3DQ96AK3 386 aaPredicted RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 DUS3LQ96G46 650 aaKnown RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF347Q96SE7 839 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 SORT1Q99523 831 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 ATF6BQ99941 703 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 SLC35A5Q9BS91 424 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 MRPL13Q9BYD1 178 aaKnown RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 C20orf27Q9GZN8 174 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 CHCHD3Q9NX63 227 aaKnown RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 THUMPD1Q9NXG2 353 aaKnown RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 SORL1Q92673 2214 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 HERC2O95714 4834 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 IGLV1-36A0A0B4J1U3 117 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 A0A1B0GWA3 101 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 A0A1B0GWJ7 208 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 PSMB11A5LHX3 300 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 NKX6-3A6NJ46 265 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 IQCF6A8MYZ5 107 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 USP17L23D6RBM5 183 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 GMDSO60547 372 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 MITFO75030 526 aaPredicted RBP4.09□□□□□ -1.75
CKAP4-203ENST00000553039 PEX11AO75192 247 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 ATP5HO75947 161 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 KRT75O95678 551 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 HLA-DPB1P04440 258 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 CHRNGP07510 517 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 FGF4P08620 206 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 LAP3P28838 519 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 CDAP32320 146 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 NAA10P41227 235 aaPredicted RBP4.09□□□□□ -1.75
CKAP4-203ENST00000553039 TGM4P49221 684 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 CEBPDP49716 269 aaPredicted RBP4.09□□□□□ -1.75
CKAP4-203ENST00000553039 CAMPP49913 170 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 RASSF2P50749 326 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 DAP3P51398 398 aaKnown RBP4.09□□□□□ -1.75
CKAP4-203ENST00000553039 DYNLT3P51808 116 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 LUMP51884 338 aaPredicted RBP4.09□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF133P52736 654 aaPredicted RBP4.09□□□□□ -1.75
CKAP4-203ENST00000553039 CLDN8P56748 225 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 OR12D2P58182 307 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 SCRN3Q0VDG4 424 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 OR8G1Q15617 311 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 MPPED2Q15777 294 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 UGT3A2Q3SY77 523 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 SERTAD4-AS1Q5TG53 156 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 TEX36Q5VZQ5 186 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 METTL21CQ5VZV1 264 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 OR4F3Q6IEY1 312 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 CFAP77Q6ZQR2 320 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 PRSS45Q7RTY3 260 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 OR2W3Q7Z3T1 314 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 TMEM219Q86XT9 240 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 CLECL1Q8IZS7 167 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 OSR2Q8N2R0 312 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 FNDC5Q8NAU1 212 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 OR2T11Q8NH01 316 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 SETD6Q8TBK2 473 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 ACOT11Q8WXI4 607 aaPredicted RBP4.09□□□□□ -1.75
CKAP4-203ENST00000553039 STMN2Q93045 179 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 C12orf43Q96C57 262 aaKnown RBP4.09□□□□□ -1.75
CKAP4-203ENST00000553039 TEX37Q96LM6 180 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 CDRT15Q96T59 188 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 ATP6V0BQ99437 205 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 CCL13Q99616 98 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 TMEM43Q9BTV4 400 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 SNTG1Q9NSN8 517 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 TAS2R5Q9NYW4 299 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 MGAT4CQ9UBM8 478 aa4.09□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF443Q9Y2A4 671 aaPredicted RBP4.09□□□□□ -1.75
CKAP4-203ENST00000553039 RYR1P21817 5038 aa4.09□□□□□ -1.76
CKAP4-203ENST00000553039 MUC4Q99102 2169 aa4.09□□□□□ -1.76
CKAP4-203ENST00000553039 IGKV1D-42A0A075B6H8 117 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 PRR23D1E9PI22 279 aaPredicted RBP4.08□□□□□ -1.76
CKAP4-203ENST00000553039 BLOC1S5-TXNDC5H3BN57 136 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 M0QZK8 103 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms