RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 SMIM3Q9BZL3 60 aa13.24□□□□□ -0.29
PDE1B-207ENST00000550620 VN1R1Q9GZP7 353 aa13.24□□□□□ -0.29
PDE1B-207ENST00000550620 ZNF701Q9NV72 531 aaPredicted RBP13.24□□□□□ -0.29
PDE1B-207ENST00000550620 NSG2Q9Y328 171 aa13.24□□□□□ -0.29
PDE1B-207ENST00000550620 CHD7Q9P2D1 2997 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 FREM3P0C091 2139 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 ZNF17P17021 662 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 RAB5AP20339 215 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 S100PP25815 95 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 THBS4P35443 961 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 UCP2P55851 309 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 GRB2P62993 217 aaKnown RBP13.23□□□□□ -0.29
PDE1B-207ENST00000550620 KISS1Q15726 138 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 GGNBP1Q5YKI7 109 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 FAM57BQ71RH2 274 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 SEMA6DQ8NFY4 1073 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 SLC25A43Q8WUT9 341 aaPredicted RBP13.23□□□□□ -0.29
PDE1B-207ENST00000550620 EIF5A2Q9GZV4 153 aaKnown RBP13.23□□□□□ -0.29
PDE1B-207ENST00000550620 ARV1Q9H2C2 271 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 B3GAT1Q9P2W7 334 aa13.23□□□□□ -0.29
PDE1B-207ENST00000550620 MKI67P46013 3256 aaKnown RBP13.23□□□□□ -0.29
PDE1B-207ENST00000550620 IGKV1-9A0A0C4DH69 117 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 CRYM-AS1A6NIL9 109 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 RHPN2P1A8MT19 583 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 EIF1BO60739 113 aaKnown RBP13.22□□□□□ -0.29
PDE1B-207ENST00000550620 IGLV3-19P01714 112 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 DANCRP0C864 163 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 PGA4P0DJD7 388 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 PGA3P0DJD8 388 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 EIF1P41567 113 aaKnown RBP13.22□□□□□ -0.29
PDE1B-207ENST00000550620 RAB5CP51148 216 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 SUCLG1P53597 346 aaKnown RBP13.22□□□□□ -0.29
PDE1B-207ENST00000550620 RNF4P78317 190 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 ACY1Q03154 408 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 ZNF616Q08AN1 781 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 ADPRHL1Q8NDY3 354 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 OR14K1Q8NGZ2 314 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 SNIP1Q8TAD8 396 aaKnown RBP13.22□□□□□ -0.29
PDE1B-207ENST00000550620 MAFIPQ8WZ33 124 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 ZNF2Q9BSG1 426 aaPredicted RBP13.22□□□□□ -0.29
PDE1B-207ENST00000550620 PBDC1Q9BVG4 233 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 TM2D1Q9BX74 207 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 SPACA1Q9HBV2 294 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 STRAPQ9Y3F4 350 aaKnown RBP13.22□□□□□ -0.29
PDE1B-207ENST00000550620 COL5A1P20908 1838 aaPredicted RBP13.22□□□□□ -0.29
PDE1B-207ENST00000550620 ALPK2Q86TB3 2170 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 A6NLC8 198 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 SCGB1D2O95969 90 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 ACKR3P25106 362 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 CAMLGP49069 296 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 FAM209BQ5JX69 171 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 LINC00469Q8N7U9 141 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 OR1J1Q8NGS3 322 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 MALSU1Q96EH3 234 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 SHDQ96IW2 340 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 LMAN1LQ9HAT1 526 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 SDHAF3Q9NRP4 125 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 ZNF319Q9P2F9 582 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 KCNIP3Q9Y2W7 256 aa13.22□□□□□ -0.29
PDE1B-207ENST00000550620 A0A1W2PPH5 198 aa13.21□□□□□ -0.29
PDE1B-207ENST00000550620 NME2P1O60361 137 aa13.21□□□□□ -0.29
PDE1B-207ENST00000550620 IGHV2-5P01817 119 aa13.21□□□□□ -0.29
PDE1B-207ENST00000550620 NAT2P11245 290 aa13.21□□□□□ -0.29
PDE1B-207ENST00000550620 FOSL2P15408 326 aa13.21□□□□□ -0.29
PDE1B-207ENST00000550620 SERPINA2P20848 420 aa13.21□□□□□ -0.29
PDE1B-207ENST00000550620 ZNF41P51814 821 aaPredicted RBP13.21□□□□□ -0.29
PDE1B-207ENST00000550620 FBXW4P57775 412 aa13.21□□□□□ -0.29
PDE1B-207ENST00000550620 RAB1AP62820 205 aa13.21□□□□□ -0.29
PDE1B-207ENST00000550620 SLC25A47Q6Q0C1 308 aa13.21□□□□□ -0.29
PDE1B-207ENST00000550620 HIST2H3AQ71DI3 136 aa13.21□□□□□ -0.29
PDE1B-207ENST00000550620 OR1L3Q8NH93 324 aa13.21□□□□□ -0.29
PDE1B-207ENST00000550620 TRAV20A0A0B4J274 112 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 ETV2O00321 342 aaPredicted RBP13.21□□□□□ -0.3
PDE1B-207ENST00000550620 RER1O15258 196 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 GPR137BO60478 399 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 NME1P15531 152 aaKnown RBP13.21□□□□□ -0.3
PDE1B-207ENST00000550620 CDAP32320 146 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 ZNF133P52736 654 aaPredicted RBP13.21□□□□□ -0.3
PDE1B-207ENST00000550620 MYBPHQ13203 477 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 KCNMB1Q16558 191 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 GPR157Q5UAW9 335 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 LANCL3Q6ZV70 420 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 OR5D18Q8NGL1 313 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 ISOC2Q96AB3 205 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 PGAM5Q96HS1 289 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 MRGPRX4Q96LA9 322 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 GINS3Q9BRX5 216 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 KCNJ16Q9NPI9 418 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 PNRC2Q9NPJ4 139 aaKnown RBP13.21□□□□□ -0.3
PDE1B-207ENST00000550620 C19orf12Q9NSK7 152 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 PADI1Q9ULC6 663 aa13.21□□□□□ -0.3
PDE1B-207ENST00000550620 A0A1B0GX78 115 aa13.2□□□□□ -0.3
PDE1B-207ENST00000550620 A0A1W2PPE3 182 aa13.2□□□□□ -0.3
PDE1B-207ENST00000550620 UMAD1C9J7I0 102 aa13.2□□□□□ -0.3
PDE1B-207ENST00000550620 STMND1H3BQB6 276 aa13.2□□□□□ -0.3
PDE1B-207ENST00000550620 EIF2S3P41091 472 aaKnown RBP13.2□□□□□ -0.3
PDE1B-207ENST00000550620 P2RY1P47900 373 aa13.2□□□□□ -0.3
PDE1B-207ENST00000550620 LCN10Q6JVE6 187 aa13.2□□□□□ -0.3
PDE1B-207ENST00000550620 RPUSD3Q6P087 351 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms