RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 RAB3DO95716 219 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 TPM3P06753 285 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 PLEKP08567 350 aaPredicted RBP3.08□□□□□ -1.92
LIMA1-205ENST00000550592 GNAO1P09471 354 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 GALP22466 123 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 ARL2P36404 184 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 GPX4P36969 197 aaPredicted RBP3.08□□□□□ -1.92
LIMA1-205ENST00000550592 GBE1Q04446 702 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 MXD1Q05195 221 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 SELENBP1Q13228 472 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 POU2AF1Q16633 256 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 HSP90B2PQ58FF3 399 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 SOHLH1Q5JUK2 328 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 AGBL2Q5U5Z8 902 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 XKRXQ6PP77 449 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 LUZP2Q86TE4 346 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 LINC01551Q86U37 167 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 C12orf56Q8IXR9 622 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 CCDC112Q8NEF3 446 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 OR52K2Q8NGK3 314 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 OR10G4Q8NGN3 311 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 ZFP90Q8TF47 636 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 STARD8Q92502 1023 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 SLC17A9Q9BYT1 436 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 TPK1Q9H3S4 243 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 EXO5Q9H790 373 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 C6orf50Q9HD87 102 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 HRASLS2Q9NWW9 162 aa3.08□□□□□ -1.92
LIMA1-205ENST00000550592 PRRC2CQ9Y520 2896 aaKnown RBP3.08□□□□□ -1.92
LIMA1-205ENST00000550592 INTS1Q8N201 2190 aaKnown RBP3.08□□□□□ -1.92
LIMA1-205ENST00000550592 MAP1AP78559 2803 aaPredicted RBP3.07□□□□□ -1.92
LIMA1-205ENST00000550592 MXRA5Q9NR99 2828 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 DCHS2Q6V1P9 2916 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 ZNF469Q96JG9 3925 aaPredicted RBP3.07□□□□□ -1.92
LIMA1-205ENST00000550592 CITO14578 2027 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 CIB4A0PJX0 185 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 LRRIQ4A6NIV6 560 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 PRAMEF26H0Y7S4 382 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 EIF3HO15372 352 aaKnown RBP eCLIP3.07□□□□□ -1.92
LIMA1-205ENST00000550592 MYL2P10916 166 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 CASQ1P31415 396 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 UBE2AP49459 152 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 GTF2A1P52655 376 aaPredicted RBP3.07□□□□□ -1.92
LIMA1-205ENST00000550592 CCL7P80098 99 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 LIPEQ05469 1076 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 MERTKQ12866 999 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 MADCAM1Q13477 382 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 GGTLC2Q14390 218 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 KCTD19Q17RG1 926 aaPredicted RBP3.07□□□□□ -1.92
LIMA1-205ENST00000550592 DEFB133Q30KQ1 61 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 TMEM220Q6QAJ8 160 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 DUX4L9Q6RFH8 374 aaPredicted RBP3.07□□□□□ -1.92
LIMA1-205ENST00000550592 C16orf47Q6ZP98 133 aaPredicted RBP3.07□□□□□ -1.92
LIMA1-205ENST00000550592 TPGS1Q6ZTW0 290 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 Q6ZVH6 145 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 OAFQ86UD1 273 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 BBS7Q8IWZ6 715 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 CCDC148Q8NFR7 591 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 OR10J6PQ8NGY7 276 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 OR5B3Q8NH48 314 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 NRGNQ92686 78 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 CREB3L1Q96BA8 519 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 PLA2G12AQ9BZM1 189 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 TMEM165Q9HC07 324 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 KCNJ16Q9NPI9 418 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 LHX9Q9NQ69 397 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 PRSS16Q9NQE7 514 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 PSG8Q9UQ74 426 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 ST3GAL6Q9Y274 331 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 ARHGAP21Q5T5U3 1957 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 CHD3Q12873 2000 aaKnown RBP3.07□□□□□ -1.92
LIMA1-205ENST00000550592 MGAM2Q2M2H8 2515 aa3.07□□□□□ -1.92
LIMA1-205ENST00000550592 IGLV4-69A0A075B6H9 119 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 CASC3O15234 703 aaKnown RBP3.06□□□□□ -1.92
LIMA1-205ENST00000550592 AQP9O43315 295 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 SNAI2O43623 268 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 EIF4E2O60573 245 aaKnown RBP3.06□□□□□ -1.92
LIMA1-205ENST00000550592 CCL4P13236 92 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 CDKN2BP42772 138 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 CYB561P49447 251 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 RAB9AP51151 201 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 TRDNQ13061 729 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 CACNA1CQ13936 2221 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 ZNF235Q14590 738 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 ZSCAN26Q16670 478 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 PGGHGQ32M88 737 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 HES5Q5TA89 166 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 ITPRIPQ8IWB1 547 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 CMTM1Q8IZ96 169 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 OR2A1Q8NGT9 310 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 LMX1AQ8TE12 382 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 C8orf44Q96CB5 159 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 SDHCQ99643 169 aaPredicted RBP3.06□□□□□ -1.92
LIMA1-205ENST00000550592 C11orf70Q9BRQ4 267 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 DDA1Q9BW61 102 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 SLC40A1Q9NP59 571 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 XPNPEP1Q9NQW7 623 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 ZNF223Q9UK11 482 aaPredicted RBP3.06□□□□□ -1.92
LIMA1-205ENST00000550592 TMED5Q9Y3A6 229 aa3.06□□□□□ -1.92
LIMA1-205ENST00000550592 IGLV3-16A0A075B6K0 115 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms