RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TAGLN3Q9UI15 199 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 ZNF391Q9UJN7 358 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 SAMHD1Q9Y3Z3 626 aaKnown RBP6.25□□□□□ -1.41
NEK3-201ENST00000550331 MPC1Q9Y5U8 109 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 DOCK11Q5JSL3 2073 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 RNASEK-C17orf49H0YIS7 233 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 M0R1W7 72 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 SOX14O95416 240 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 TSPAN15O95858 294 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 PAHP00439 452 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 CST4P01036 141 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 AMY2BP19961 511 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 ATP6V1B2P21281 511 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 GSTT1P30711 240 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 CAV3P56539 151 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 ELF3P78545 371 aaPredicted RBP6.24□□□□□ -1.41
NEK3-201ENST00000550331 MXRA7P84157 204 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 IKZF1Q13422 519 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 GK3PQ14409 553 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 GFOD2Q3B7J2 385 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 FAM76BQ5HYJ3 339 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 ZNF788Q6ZQV5 615 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 FAM57BQ71RH2 274 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 SHFQ7M4L6 423 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 ERI1Q8IV48 349 aaKnown RBP6.24□□□□□ -1.41
NEK3-201ENST00000550331 Q8N7P7 452 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 ANGPTL6Q8NI99 470 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 TEX47Q8TBZ9 253 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 OR5P3Q8WZ94 311 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 TNFRSF14Q92956 283 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 ITFG2Q969R8 447 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 SEH1LQ96EE3 360 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 MED30Q96HR3 178 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 RAB3IPQ96QF0 476 aaPredicted RBP6.24□□□□□ -1.41
NEK3-201ENST00000550331 AMELYQ99218 206 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 FAM107BQ9H098 131 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 SEMA6AQ9H2E6 1030 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 MUC13Q9H3R2 512 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 METTL8Q9H825 291 aaKnown RBP6.24□□□□□ -1.41
NEK3-201ENST00000550331 REEP1Q9H902 201 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.24□□□□□ -1.41
NEK3-201ENST00000550331 SIRT7Q9NRC8 400 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 HAO2Q9NYQ3 351 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 ZNF319Q9P2F9 582 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 DNAJB11Q9UBS4 358 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 FBLN5Q9UBX5 448 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 RHBDD3Q9Y3P4 386 aa6.24□□□□□ -1.41
NEK3-201ENST00000550331 ZNF816-ZNF321PA0A0X1KG74 233 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 TCRBV5S2A0A599 114 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 ARRDC5A6NEK1 342 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 SIGLEC5O15389 551 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 PIN1P1O15428 100 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 GLCEO94923 617 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 LYNP07948 512 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 ACAA1P09110 424 aaPredicted RBP6.23□□□□□ -1.41
NEK3-201ENST00000550331 H2BFMP0C1H6 154 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 SELLP14151 372 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 PAICSP22234 425 aaKnown RBP6.23□□□□□ -1.41
NEK3-201ENST00000550331 ACKR3P25106 362 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 SAA4P35542 130 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 MNAT1P51948 309 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 UBE2E1P51965 193 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 PRDX4Q13162 271 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 BLMHQ13867 455 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 DGUOKQ16854 277 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 FAM98BQ52LJ0 330 aaKnown RBP6.23□□□□□ -1.41
NEK3-201ENST00000550331 OR2T5Q6IEZ7 315 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 LCN8Q6JVE9 175 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 C11orf88Q6PI97 169 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 CD300LDQ6UXZ3 194 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 CYP2R1Q6VVX0 501 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 CPLX4Q7Z7G2 160 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 TIGD4Q8IY51 512 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 ZDHHC23Q8IYP9 409 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 DEFB107AQ8IZN7 70 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 ARHGAP24Q8N264 748 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 PAPD5Q8NDF8 572 aaKnown RBP6.23□□□□□ -1.41
NEK3-201ENST00000550331 BEND2Q8NDZ0 799 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 OR10G2Q8NGC3 310 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 OR2T29Q8NH02 315 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 OTOSQ8NHW6 89 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 HPSE2Q8WWQ2 592 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 H1FXQ92522 213 aaKnown RBP6.23□□□□□ -1.41
NEK3-201ENST00000550331 PGAM5Q96HS1 289 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 GAFA1Q96PS6 74 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 WDR13Q9H1Z4 485 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 PPP1R3EQ9H7J1 279 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 NIPAL2Q9H841 368 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 ARL8BQ9NVJ2 186 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 VNN3Q9NY84 501 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 DNAJC27Q9NZQ0 273 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 NLKQ9UBE8 527 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 SLC25A10Q9UBX3 287 aaPredicted RBP6.23□□□□□ -1.41
NEK3-201ENST00000550331 U3KQV3 271 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 PLXNB1O43157 2135 aa6.23□□□□□ -1.41
NEK3-201ENST00000550331 TRBV23-1A0A0A0MS06 115 aa6.22□□□□□ -1.41
NEK3-201ENST00000550331 A0A1W2PQ09 198 aa6.22□□□□□ -1.41
NEK3-201ENST00000550331 MEIOCA2RUB1 952 aa6.22□□□□□ -1.41
NEK3-201ENST00000550331 ANKRD61A6NGH8 418 aa6.22□□□□□ -1.41
NEK3-201ENST00000550331 FAM183AA6NL82 134 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms