RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 OPA3Q9H6K4 179 aa14.87□□□□□ -0.03
HDAC7-227ENST00000548080 PLGRKTQ9HBL7 147 aa14.87□□□□□ -0.03
HDAC7-227ENST00000548080 FAIMQ9NVQ4 179 aa14.87□□□□□ -0.03
HDAC7-227ENST00000548080 EDARQ9UNE0 448 aa14.87□□□□□ -0.03
HDAC7-227ENST00000548080 ARFGEF3Q5TH69 2177 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 HPGDSO60760 199 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 ALX3O95076 343 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 SNRPBP14678 240 aaKnown RBP14.86□□□□□ -0.03
HDAC7-227ENST00000548080 CFPP27918 469 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 TNK1Q13470 666 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 GK2Q14410 553 aaPredicted RBP14.86□□□□□ -0.03
HDAC7-227ENST00000548080 MST1LQ2TV78 715 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 AGAP6Q5VW22 663 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 C11orf71Q6IPW1 123 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 RFPL4BQ6ZWI9 263 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 MRPL21Q7Z2W9 205 aaKnown RBP14.86□□□□□ -0.03
HDAC7-227ENST00000548080 CCDC190Q86UF4 302 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 LRP11Q86VZ4 500 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 LAX1Q8IWV1 398 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 TRMT10AQ8TBZ6 339 aaKnown RBP14.86□□□□□ -0.03
HDAC7-227ENST00000548080 CACNG6Q9BXT2 260 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 WDR12Q9GZL7 423 aaKnown RBP14.86□□□□□ -0.03
HDAC7-227ENST00000548080 CHST5Q9GZS9 411 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 CBLN4Q9NTU7 201 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 STEAP1Q9UHE8 339 aa14.86□□□□□ -0.03
HDAC7-227ENST00000548080 A0A0B4J203 849 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 SLC17A2O00624 439 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 PAHP00439 452 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 SERPINF1P36955 418 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 ETV6P41212 452 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 PTH2RP49190 550 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 RAB11BQ15907 218 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 C1orf100Q5SVJ3 147 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 ZBTB37Q5TC79 503 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 CDH26Q8IXH8 852 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 OR5AS1Q8N127 324 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 OR52N4Q8NGI2 321 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 ZFAND2BQ8WV99 257 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 MBD6Q96DN6 1003 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 SYT3Q9BQG1 590 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 MRPL37Q9BZE1 423 aaKnown RBP14.85□□□□□ -0.03
HDAC7-227ENST00000548080 POFUT1Q9H488 388 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 BEX4Q9NWD9 120 aaPredicted RBP14.85□□□□□ -0.03
HDAC7-227ENST00000548080 MYEF2Q9P2K5 600 aaKnown RBP14.85□□□□□ -0.03
HDAC7-227ENST00000548080 ADAM30Q9UKF2 790 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 SPEF1Q9Y4P9 236 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 VPS13CQ709C8 3753 aa14.85□□□□□ -0.03
HDAC7-227ENST00000548080 GGT3PA6NGU5 568 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 ALDOBP05062 364 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 CALCBP10092 127 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 UCP2P55851 309 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 PRSS12P56730 875 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 CLDN12P56749 244 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 PPP1CBP62140 327 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 SPANXN2Q5MJ10 180 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 CLVS2Q5SYC1 327 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 FAM166AQ6J272 317 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 UNQ6126/PRO20091Q6UXV3 157 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 LYPD6Q86Y78 171 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 JAGN1Q8N5M9 183 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 SAMD12Q8N8I0 201 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 OR5H6Q8NGV6 325 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 CGGBP1Q9UFW8 167 aaPredicted RBP14.84□□□□□ -0.03
HDAC7-227ENST00000548080 SPATA2Q9UM82 520 aa14.84□□□□□ -0.03
HDAC7-227ENST00000548080 IGKV1-9A0A0C4DH69 117 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 ZNF816-ZNF321PA0A0X1KG74 233 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 OVOL3O00110 214 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 MAGEB3O15480 346 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 OCMP0CE72 109 aaPredicted RBP14.83□□□□□ -0.03
HDAC7-227ENST00000548080 HTR2CP28335 458 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 RAD52P43351 418 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 ZNF45Q02386 682 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 HLXQ14774 488 aaPredicted RBP14.83□□□□□ -0.03
HDAC7-227ENST00000548080 UBE2V2Q15819 145 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 ALKBH6Q3KRA9 238 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 TMEM42Q69YG0 159 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 OR56B2PQ8NGI1 322 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 OR6M1Q8NGM8 313 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 OR1J1Q8NGS3 322 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 LGALS14Q8TCE9 139 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 DIRAS2Q96HU8 199 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 CMTM3Q96MX0 182 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 SORCS2Q96PQ0 1159 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 METTL17Q9H7H0 456 aaPredicted RBP14.83□□□□□ -0.03
HDAC7-227ENST00000548080 ZNF442Q9H7R0 627 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 LIN7BQ9HAP6 207 aa14.83□□□□□ -0.03
HDAC7-227ENST00000548080 FAM25AB3EWG3 89 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 FAM25CB3EWG5 89 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 FAM25GB3EWG6 89 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 GMDSO60547 372 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 NRASP01111 189 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 HCKP08631 526 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 ELK1P19419 428 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 TUBG1P23258 451 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 GLRXP35754 106 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 EVX1P49640 407 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 ATP5J2P56134 94 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 SCAND1P57086 179 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 P2RY14Q15391 338 aa14.82□□□□□ -0.04
HDAC7-227ENST00000548080 SWI5Q1ZZU3 235 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms