RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CD276Q5ZPR3 534 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 USP43Q70EL4 1123 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 DOK3Q7L591 496 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 CATSPERDQ86XM0 798 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 PHC2Q8IXK0 858 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 SCCPDHQ8NBX0 429 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 OR5A2Q8NGI9 324 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 UBE2FQ969M7 185 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 PPP1R14AQ96A00 147 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 RNFT2Q96EX2 444 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 TECTBQ96PL2 329 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 NUDT16L1Q9BRJ7 211 aaKnown RBP13.23□□□□□ -0.29
DDX54-204ENST00000546898 FGF23Q9GZV9 251 aaPredicted RBP13.23□□□□□ -0.29
DDX54-204ENST00000546898 PCDHGB1Q9Y5G3 927 aa13.23□□□□□ -0.29
DDX54-204ENST00000546898 A0A1B0GTI1 187 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.22□□□□□ -0.29
DDX54-204ENST00000546898 BAG2O95816 211 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 GYPAP02724 150 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 GABRB1P18505 474 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 GPM6AP51674 278 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 ISL1P61371 349 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 ZNF85Q03923 595 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 CEP78Q5JTW2 689 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 CLVS2Q5SYC1 327 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 PLCXD3Q63HM9 321 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 TMEM42Q69YG0 159 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 SLC36A1Q7Z2H8 476 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 ENTHD1Q8IYW4 607 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 CCDC54Q8NEL0 328 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 OR14K1Q8NGZ2 314 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 RORBQ92753 470 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 RPL3LQ92901 407 aaKnown RBP13.22□□□□□ -0.29
DDX54-204ENST00000546898 Q96MT0 163 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 JMJD8Q96S16 334 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 MYCBPQ99417 103 aaPredicted RBP13.22□□□□□ -0.29
DDX54-204ENST00000546898 SUCNR1Q9BXA5 334 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 DNTTIP1Q9H147 329 aa13.22□□□□□ -0.29
DDX54-204ENST00000546898 IGHV3OR15-7A0A075B7D8 119 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 LOC100130705A0A1B0GUX0 176 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 A0A1B0GVI7 797 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 ZNF732B4DXR9 585 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 C22orf46C9J442 243 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 J3QRE1 110 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 P2RY10O00398 339 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 DLGAP1O14490 977 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 TMPRSS2O15393 492 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 SLC16A6O15403 523 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 NRASP01111 189 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 FPR2P25090 351 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 HILS1P60008 231 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 CDONQ4KMG0 1287 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 WDR38Q5JTN6 314 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 STUMQ69YW2 141 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 MOB3CQ70IA8 216 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 KCTD20Q7Z5Y7 419 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 BPIFB2Q8N4F0 458 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 ZFAND2BQ8WV99 257 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 UPRTQ96BW1 309 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 OR51I2Q9H344 312 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 PLEKHA1Q9HB21 404 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 SMURF1Q9HCE7 757 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 C8orf4Q9NR00 106 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 FAM118AQ9NWS6 357 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 SMPD3Q9NY59 655 aaPredicted RBP13.21□□□□□ -0.29
DDX54-204ENST00000546898 DNAJB11Q9UBS4 358 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 GNG8Q9UK08 70 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 NUP50Q9UKX7 468 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 SLC22A13Q9Y226 551 aa13.21□□□□□ -0.29
DDX54-204ENST00000546898 EXOGQ9Y2C4 368 aaKnown RBP13.21□□□□□ -0.29
DDX54-204ENST00000546898 DAPL1A0PJW8 107 aa13.2□□□□□ -0.3
DDX54-204ENST00000546898 ECDO95905 644 aaPredicted RBP13.2□□□□□ -0.3
DDX54-204ENST00000546898 LIPFP07098 398 aa13.2□□□□□ -0.3
DDX54-204ENST00000546898 UBCP0CG48 685 aaKnown RBP13.2□□□□□ -0.3
DDX54-204ENST00000546898 ACTA2P62736 377 aa13.2□□□□□ -0.3
DDX54-204ENST00000546898 ACTG2P63267 376 aa13.2□□□□□ -0.3
DDX54-204ENST00000546898 ZNF91Q05481 1191 aa13.2□□□□□ -0.3
DDX54-204ENST00000546898 TP53I3Q53FA7 332 aa13.2□□□□□ -0.3
DDX54-204ENST00000546898 KLF17Q5JT82 389 aaPredicted RBP13.2□□□□□ -0.3
DDX54-204ENST00000546898 ATPAF1Q5TC12 328 aaPredicted RBP13.2□□□□□ -0.3
DDX54-204ENST00000546898 ACBD7Q8N6N7 88 aa13.2□□□□□ -0.3
DDX54-204ENST00000546898 ZNF555Q8NEP9 628 aa13.2□□□□□ -0.3
DDX54-204ENST00000546898 RHOXF1Q8NHV9 184 aa13.2□□□□□ -0.3
DDX54-204ENST00000546898 ZNF671Q8TAW3 534 aa13.2□□□□□ -0.3
DDX54-204ENST00000546898 MRPL48Q96GC5 212 aaKnown RBP13.2□□□□□ -0.3
DDX54-204ENST00000546898 ACOXLQ9NUZ1 547 aa13.2□□□□□ -0.3
DDX54-204ENST00000546898 NKX6-3A6NJ46 265 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 DVL1O14640 695 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 GPR37O15354 613 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 AKR7A2O43488 359 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 SYT7O43581 403 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 VENTXO95231 258 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 DBTP11182 482 aaKnown RBP13.19□□□□□ -0.3
DDX54-204ENST00000546898 GLRA1P23415 457 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 SRSF2Q01130 221 aaKnown RBP13.19□□□□□ -0.3
DDX54-204ENST00000546898 TUSC1Q2TAM9 212 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 ZNF573Q86YE8 665 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 EGFL6Q8IUX8 553 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 PRSS35Q8N3Z0 413 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 PNLDC1Q8NA58 520 aaKnown RBP13.19□□□□□ -0.3
DDX54-204ENST00000546898 AQP3Q92482 292 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms