RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 E5RGE8 158 aa12.52□□□□□ -0.41
SRP54-202ENST00000546080 HPNP05981 417 aa12.52□□□□□ -0.41
SRP54-202ENST00000546080 OR13C7P0DN81 318 aa12.52□□□□□ -0.41
SRP54-202ENST00000546080 FHITP49789 147 aa12.52□□□□□ -0.41
SRP54-202ENST00000546080 KIAA0141Q14154 515 aaPredicted RBP12.52□□□□□ -0.41
SRP54-202ENST00000546080 DAZLQ92904 295 aaKnown RBP12.52□□□□□ -0.41
SRP54-202ENST00000546080 MESP1Q9BRJ9 268 aa12.52□□□□□ -0.41
SRP54-202ENST00000546080 EMC6Q9BV81 110 aa12.52□□□□□ -0.41
SRP54-202ENST00000546080 GPR84Q9NQS5 396 aa12.52□□□□□ -0.41
SRP54-202ENST00000546080 CUTCQ9NTM9 273 aa12.52□□□□□ -0.41
SRP54-202ENST00000546080 ZNF701Q9NV72 531 aaPredicted RBP12.52□□□□□ -0.41
SRP54-202ENST00000546080 NSG2Q9Y328 171 aa12.52□□□□□ -0.41
SRP54-202ENST00000546080 STRAPQ9Y3F4 350 aaKnown RBP12.52□□□□□ -0.41
SRP54-202ENST00000546080 ARID1BQ8NFD5 2236 aaPredicted RBP12.51□□□□□ -0.41
SRP54-202ENST00000546080 YIF1AO95070 293 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 BLVRBP30043 206 aaPredicted RBP12.51□□□□□ -0.41
SRP54-202ENST00000546080 MAS1LP35410 378 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 BIDP55957 195 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 RPS23P62266 143 aaKnown RBP12.51□□□□□ -0.41
SRP54-202ENST00000546080 CLINT1Q14677 625 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 PARM1Q6UWI2 310 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 SEMA6DQ8NFY4 1073 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 OR8B12Q8NGG6 310 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 OR2AJ1Q8NGZ0 328 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 TMEM234Q8WY98 164 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 BSCL2Q96G97 398 aaPredicted RBP12.51□□□□□ -0.41
SRP54-202ENST00000546080 GNRHR2Q96P88 292 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 WDR77Q9BQA1 342 aaPredicted RBP12.51□□□□□ -0.41
SRP54-202ENST00000546080 GINS3Q9BRX5 216 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 ZNF2Q9BSG1 426 aaPredicted RBP12.51□□□□□ -0.41
SRP54-202ENST00000546080 PECRQ9BY49 303 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 WWTR1Q9GZV5 400 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 CHST11Q9NPF2 352 aa12.51□□□□□ -0.41
SRP54-202ENST00000546080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.51□□□□□ -0.41
SRP54-202ENST00000546080 NPIPB13A6NJU9 1138 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 RHPN2P1A8MT19 583 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 NPIPB4C9JG80 1138 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 HOXA5P20719 270 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 RPS10P46783 165 aaKnown RBP12.5□□□□□ -0.41
SRP54-202ENST00000546080 OR1D4P47884 311 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 P2RY1P47900 373 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 SUCLG1P53597 346 aaKnown RBP12.5□□□□□ -0.41
SRP54-202ENST00000546080 ZNF121P58317 390 aaPredicted RBP12.5□□□□□ -0.41
SRP54-202ENST00000546080 HEPN1Q6WQI6 88 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 FAM89BQ8N5H3 189 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 OR5D18Q8NGL1 313 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 AKR7LQ8NHP1 331 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 MFSD8Q8NHS3 518 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 SLC25A43Q8WUT9 341 aaPredicted RBP12.5□□□□□ -0.41
SRP54-202ENST00000546080 FGF14Q92915 247 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 RPP25Q9BUL9 199 aaKnown RBP12.5□□□□□ -0.41
SRP54-202ENST00000546080 TREM2Q9NZC2 230 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 HDGFL3Q9Y3E1 203 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 PUS1Q9Y606 427 aaKnown RBP eCLIP12.5□□□□□ -0.41
SRP54-202ENST00000546080 HS3ST3A1Q9Y663 406 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 CACNA1IQ9P0X4 2223 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 CRYM-AS1A6NIL9 109 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 MASP2O00187 686 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 GPR137BO60478 399 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 C1QL1O75973 258 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 CTSDP07339 412 aaPredicted RBP12.5□□□□□ -0.41
SRP54-202ENST00000546080 S100A2P29034 98 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 GABRA4P48169 554 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 TMEM156Q8N614 296 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 CHRDQ9H2X0 955 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 OPA3Q9H6K4 179 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 C8orf33Q9H7E9 229 aaPredicted RBP12.5□□□□□ -0.41
SRP54-202ENST00000546080 WFDC1Q9HC57 220 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 COPS7AQ9UBW8 275 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 LHFPL6Q9Y693 200 aa12.5□□□□□ -0.41
SRP54-202ENST00000546080 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 A0A1B0GV50 99 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 SERPINE3A8MV23 424 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 SLC34A2O95436 690 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 MBPP02686 304 aaPredicted RBP12.49□□□□□ -0.41
SRP54-202ENST00000546080 MYOGP15173 224 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 CDX1P47902 265 aaPredicted RBP12.49□□□□□ -0.41
SRP54-202ENST00000546080 DEFA6Q01524 100 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 TTLL10Q6ZVT0 673 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 SUMF2Q8NBJ7 301 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 LFNGQ8NES3 379 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.49□□□□□ -0.41
SRP54-202ENST00000546080 SHDQ96IW2 340 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 NUDT22Q9BRQ3 303 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 SH3BGRL3Q9H299 93 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 SERPINA2P20848 420 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 CAPZBP47756 277 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 PYY3Q5JQD4 70 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 SOHLH1Q5JUK2 328 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 DOK3Q7L591 496 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 YPEL4Q96NS1 127 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 S100A13Q99584 98 aa12.49□□□□□ -0.41
SRP54-202ENST00000546080 IGKV1-9A0A0C4DH69 117 aa12.48□□□□□ -0.41
SRP54-202ENST00000546080 FOXI3A8MTJ6 420 aaPredicted RBP12.48□□□□□ -0.41
SRP54-202ENST00000546080 ZNF17P17021 662 aa12.48□□□□□ -0.41
SRP54-202ENST00000546080 PPP1CCP36873 323 aaKnown RBP12.48□□□□□ -0.41
SRP54-202ENST00000546080 NDUFA6P56556 154 aa12.48□□□□□ -0.41
SRP54-202ENST00000546080 C14orf28Q4W4Y0 310 aa12.48□□□□□ -0.41
SRP54-202ENST00000546080 DMRTC1Q5HYR2 192 aa12.48□□□□□ -0.41
SRP54-202ENST00000546080 HSD17B11Q8NBQ5 300 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms