RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 BTNL3Q6UXE8 466 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 FAM57BQ71RH2 274 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 BPIFB2Q8N4F0 458 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 CSNK2A3Q8NEV1 391 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 BBS1Q8NFJ9 593 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 OR8S1Q8NH09 359 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 OR5K1Q8NHB7 308 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 CFHR4Q92496 578 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 DVL3Q92997 716 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-223ENST00000545440 DUS3LQ96G46 650 aaKnown RBP6.4□□□□□ -1.38
SNHG1-223ENST00000545440 MRI1Q9BV20 369 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 SUCNR1Q9BXA5 334 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 ABCB9Q9NP78 766 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 TRIM36Q9NQ86 728 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 MMP26Q9NRE1 261 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 KRT84Q9NSB2 600 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 UFSP2Q9NUQ7 469 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 DNAJC27Q9NZQ0 273 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 RNF7Q9UBF6 113 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 ZNF391Q9UJN7 358 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 AUP1Q9Y679 476 aa6.4□□□□□ -1.38
SNHG1-223ENST00000545440 TRAV38-1A0A0B4J264 116 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 IGHV2-70DA0A0C4DH43 119 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 CCDC182A6NF36 153 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 A6NLC8 198 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 G3V2T6 193 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 LGALS8O00214 317 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 VENTXO95231 258 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 ALOX5APP20292 161 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 FASP25445 335 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 NPY4RP50391 375 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 DAPP51397 102 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 RAP2BP61225 183 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 PAX8Q06710 450 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 APOFQ13790 326 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 PTGES3Q15185 160 aaKnown RBP6.39□□□□□ -1.39
SNHG1-223ENST00000545440 FAM201AQ5SY85 155 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 TMEM236Q5W0B7 351 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 KDM4DQ6B0I6 523 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 KCTD18Q6PI47 426 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-223ENST00000545440 DEGS2Q6QHC5 323 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 LRRN1Q6UXK5 716 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 OVCH2Q7RTZ1 564 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-223ENST00000545440 PPP1R35Q8TAP8 253 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 ST8SIA2Q92186 375 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 TFAP2CQ92754 450 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 RAB24Q969Q5 203 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 ITFG2Q969R8 447 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 SGK3Q96BR1 496 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 PGAM5Q96HS1 289 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 CNN2Q99439 309 aaKnown RBP6.39□□□□□ -1.39
SNHG1-223ENST00000545440 SLC6A7Q99884 636 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 PAPOLGQ9BWT3 736 aaKnown RBP6.39□□□□□ -1.39
SNHG1-223ENST00000545440 YIPF3Q9GZM5 350 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 TVP23BQ9NYZ1 205 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF319Q9P2F9 582 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 CLN8Q9UBY8 286 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 LAMP5Q9UJQ1 280 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 KLHDC2Q9Y2U9 406 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 LRP12Q9Y561 859 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 AP4S1Q9Y587 144 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 N6AMT1Q9Y5N5 214 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 TMEM14AQ9Y6G1 99 aa6.39□□□□□ -1.39
SNHG1-223ENST00000545440 A0A0U1RQV5 110 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 hCG_1807616A0A1W2PRN6 198 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 OOEPA6NGQ2 149 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 ACOD1A6NK06 481 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 ANXA2P2A6NMY6 339 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 ZAR1LA6NP61 321 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 TRIM77I1YAP6 450 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 NDUFA2O43678 99 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 ENSAO43768 121 aaKnown RBP6.38□□□□□ -1.39
SNHG1-223ENST00000545440 PRKYO43930 277 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 CIB2O75838 187 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 LHBP01229 141 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 CD1AP06126 327 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 DCTDP32321 178 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 IL5RAQ01344 420 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF829Q3KNS6 432 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-223ENST00000545440 KHDC1LQ5JSQ8 128 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 SLX4IPQ5VYV7 408 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 NXNL2Q5VZ03 156 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 TEX36Q5VZQ5 186 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 WDR25Q64LD2 544 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-223ENST00000545440 C12orf73Q69YU5 71 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF529Q6P280 563 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 DOK3Q7L591 496 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 WDR86Q86TI4 376 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 GCSAMQ8N6F7 178 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-223ENST00000545440 OR8B12Q8NGG6 310 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 FAM216AQ8WUB2 273 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 THEM6Q8WUY1 208 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 RAB40AQ8WXH6 277 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 ASB17Q8WXJ9 295 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 UPRTQ96BW1 309 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 MNTQ99583 582 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 TEAD3Q99594 435 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 OSBPL10Q9BXB5 764 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms