RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	PILRB	Q9UKJ0	227 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	PTRH2	Q9Y3E5	179 aa	Known RBP	11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	POMT1	Q9Y6A1	747 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	PCDH15	Q96QU1	1955 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	NSG1	A0A0A6YYJ2	146 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	ZNF814	B7Z6K7	855 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	TOR1A	O14656	332 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	TSPAN9	O75954	239 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	SERPINA5	P05154	406 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	SRD5A2	P31213	254 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	DEFA5	Q01523	94 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	NRN1L	Q496H8	165 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	PRAMEF20	Q5VT98	475 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	PMS2CL	Q68D20	193 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	GALNTL5	Q7Z4T8	443 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	ZNF100	Q8IYN0	542 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	IFI44	Q8TCB0	444 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	NABP1	Q96AH0	204 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	LRRC46	Q96FV0	321 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	NKX6-2	Q9C056	277 aa	Predicted RBP	11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	FAM117A	Q9C073	453 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	WDR13	Q9H1Z4	485 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	FN3KRP	Q9HA64	309 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	SH2D2A	Q9NP31	389 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	PCDHB10	Q9UN67	800 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	FREM3	P0C091	2139 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	ADAMTS20	P59510	1910 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	EXPH5	Q8NEV8	1989 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	PIGBOS1	A0A0B4J2F0	54 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	TMEM218	A2RU14	115 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	SGCE	O43556	437 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	ZIC3	O60481	467 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	ATG12	O94817	140 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669		P04436	131 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	COX6A1	P12074	109 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	FOLR3	P41439	243 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	MTCP1	P56278	107 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	MLF1	P58340	268 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	RSU1	Q15404	277 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	PDSS1	Q5T2R2	415 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	RIPPLY2	Q5TAB7	128 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	AADACL3	Q5VUY0	350 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	WDR5B	Q86VZ2	330 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	BPIFC	Q8NFQ6	507 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	OR13G1	Q8NGZ3	307 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	TMEM230	Q96A57	120 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	NARS2	Q96I59	477 aa	Known RBP	11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	ZNF75A	Q96N20	296 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	CNTNAP3B	Q96NU0	1288 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	SPACA5	Q96QH8	159 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	SYT3	Q9BQG1	590 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	C1QTNF6	Q9BXI9	259 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	PLEKHA2	Q9HB19	425 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	ELL3	Q9HB65	397 aa	Predicted RBP	11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	NECAP2	Q9NVZ3	263 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	PRELID1	Q9Y255	219 aa		11.43	□□□□□ -0.58
CPSF7-223	ENST00000544669	RAD51D	O75771	328 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	JTB	O76095	146 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	SNAPIN	O95295	136 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	CER1	O95813	267 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	OPN1LW	P04000	364 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	GAPDH	P04406	335 aa	Known RBP	11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	TMEM225B	P0DP42	221 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	SERPINA2	P20848	420 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	RBP2	P50120	134 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	FOXL2	P58012	376 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	ZNF169	Q14929	603 aa	Predicted RBP	11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	SLC9A3R2	Q15599	337 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	UBE2V2	Q15819	145 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	HYAL4	Q2M3T9	481 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	ZNF585A	Q6P3V2	769 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	ASCL4	Q6XD76	172 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	POC1A	Q8NBT0	407 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	CLRN3	Q8NCR9	226 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	FNDC9	Q8TBE3	224 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	LYZL4	Q96KX0	146 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669		Q96M66	194 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	TSNAX	Q99598	290 aa	Known RBP	11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	OCIAD1	Q9NX40	245 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	SLC39A1	Q9NY26	324 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	IL36G	Q9NZH8	169 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	SLC7A11	Q9UPY5	501 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	TIMM10B	Q9Y5J6	103 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	HRH3	Q9Y5N1	445 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	OR6C6	A6NF89	314 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	CST4	P01036	141 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	HPN	P05981	417 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	IL15RA	Q13261	267 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	BEX5	Q5H9J7	111 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	FAM74A1	Q5RGS3	127 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	UNQ6126/PRO20091	Q6UXV3	157 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	OR2I1P	Q8NGU4	316 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	OR1F12	Q8NHA8	337 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	DMRTA2	Q96SC8	542 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	ASF1B	Q9NVP2	202 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	ATPIF1	Q9UII2	106 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	ANXA10	Q9UJ72	324 aa		11.42	□□□□□ -0.58
CPSF7-223	ENST00000544669	SPAG17	Q6Q759	2223 aa		11.41	□□□□□ -0.58
CPSF7-223	ENST00000544669		B4E171	279 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms