RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ACOXLQ9NUZ1 547 aa5.01□□□□□ -1.61
CPSF7-222ENST00000544585 UBAP1Q9NZ09 502 aa5.01□□□□□ -1.61
CPSF7-222ENST00000544585 CNOT2Q9NZN8 540 aaKnown RBP5.01□□□□□ -1.61
CPSF7-222ENST00000544585 CALML5Q9NZT1 146 aa5.01□□□□□ -1.61
CPSF7-222ENST00000544585 PSMC3IPQ9P2W1 217 aaPredicted RBP5.01□□□□□ -1.61
CPSF7-222ENST00000544585 SEC14L4Q9UDX3 406 aa5.01□□□□□ -1.61
CPSF7-222ENST00000544585 MARCOQ9UEW3 520 aaPredicted RBP5.01□□□□□ -1.61
CPSF7-222ENST00000544585 IL20RAQ9UHF4 553 aa5.01□□□□□ -1.61
CPSF7-222ENST00000544585 RABL2BQ9UNT1 228 aa5.01□□□□□ -1.61
CPSF7-222ENST00000544585 NPTNQ9Y639 398 aa5.01□□□□□ -1.61
CPSF7-222ENST00000544585 V9GYY5 206 aaPredicted RBP5.01□□□□□ -1.61
CPSF7-222ENST00000544585 RYR3Q15413 4870 aa5.01□□□□□ -1.61
CPSF7-222ENST00000544585 TRRAPQ9Y4A5 3859 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 TRBV5-5A0A0J9YX44 114 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 IQCMA0A1B0GVH7 501 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 PLSCR5A0PG75 271 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 VGLL3A8MV65 326 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 COPEO14579 308 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 CLPXO76031 633 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 FARS2O95363 451 aaKnown RBP5□□□□□ -1.61
CPSF7-222ENST00000544585 SNAP29O95721 258 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 SELEP16581 610 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 FUT1P19526 365 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 RPS4Y1P22090 263 aaKnown RBP5□□□□□ -1.61
CPSF7-222ENST00000544585 PRDX6P30041 224 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 SERPINB5P36952 375 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 RAG2P55895 527 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 CKAP4Q07065 602 aaKnown RBP5□□□□□ -1.61
CPSF7-222ENST00000544585 LRRC74AQ0VAA2 488 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 FUT5Q11128 374 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 RBM39Q14498 530 aaKnown RBP5□□□□□ -1.61
CPSF7-222ENST00000544585 CASP8Q14790 479 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 WHAMMP3Q1A5X7 153 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 TBC1D28Q2M2D7 210 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 MS4A18Q3C1V0 323 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 ZNF718Q3SXZ3 478 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 TMEM155Q4W5P6 130 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 LIN52Q52LA3 116 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 XKR7Q5GH72 579 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 PHYHD1Q5SRE7 291 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 TMEM53Q6P2H8 277 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 BTNL3Q6UXE8 466 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 HMGN2P46Q86SG4 172 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 LRRC28Q86X40 367 aaPredicted RBP5□□□□□ -1.61
CPSF7-222ENST00000544585 C10orf107Q8IVU9 208 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 SKA3Q8IX90 412 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 TMEM123Q8N131 208 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 SPICQ8N5J4 248 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 TMEM86BQ8N661 226 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 IQCF1Q8N6M8 205 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 ANKFN1Q8N957 763 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 SLC30A7Q8NEW0 376 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 OR6N1Q8NGY5 312 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 OR6S1Q8NH40 331 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 OR52P1PQ8NH57 321 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 PNPT1Q8TCS8 783 aaKnown RBP5□□□□□ -1.61
CPSF7-222ENST00000544585 SLC38A4Q969I6 547 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 TUBGCP3Q96CW5 907 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 ZIM3Q96PE6 472 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 TXN2Q99757 166 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 SSX3Q99909 188 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 C1orf50Q9BV19 199 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 SLC19A3Q9BZV2 496 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 ZNF446Q9NWS9 450 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 RPS6KB2Q9UBS0 482 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 IFT52Q9Y366 437 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 VWFP04275 2813 aa5□□□□□ -1.61
CPSF7-222ENST00000544585 KMT2CQ8NEZ4 4911 aaKnown RBP4.99□□□□□ -1.61
CPSF7-222ENST00000544585 A0A0U1RRA0 63 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 A0A1W2PS18 150 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 C5orf63A6NC05 138 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 A8MXK9 166 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 SRRM5B3KS81 715 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 ANGPT2O15123 496 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 RIPK2O43353 540 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 KRT75O95678 551 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 NQO1P15559 274 aaKnown RBP4.99□□□□□ -1.61
CPSF7-222ENST00000544585 GRPRP30550 384 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 CD80P33681 288 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 CRISP3P54108 245 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 HERV-K104P63124 156 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 PMS2P3Q13401 168 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 SPHARQ15513 63 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 CHI3L2Q15782 390 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 SLC36A2Q495M3 483 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 FGD3Q5JSP0 725 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 CARD17Q5XLA6 110 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 C11orf87Q6NUJ2 197 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 SLC27A4Q6P1M0 643 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 FIP1L1Q6UN15 594 aaKnown RBP4.99□□□□□ -1.61
CPSF7-222ENST00000544585 DHRS11Q6UWP2 260 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 ZNF620Q6ZNG0 422 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 ZNF584Q8IVC4 421 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 PARP8Q8N3A8 854 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 SLC22A24Q8N4F4 322 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 ZNF383Q8NA42 475 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 DNAJA4Q8WW22 397 aaPredicted RBP4.99□□□□□ -1.61
CPSF7-222ENST00000544585 TAF15Q92804 592 aaKnown RBP eCLIP4.99□□□□□ -1.61
CPSF7-222ENST00000544585 TESCQ96BS2 214 aa4.99□□□□□ -1.61
CPSF7-222ENST00000544585 UPRTQ96BW1 309 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms