RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 RPS19P39019 145 aaKnown RBP8.15□□□□□ -1.1
YBX3-215ENST00000544504 EVX1P49640 407 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 FUT6P51993 359 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 SCAND1P57086 179 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 HLXQ14774 488 aaPredicted RBP8.15□□□□□ -1.1
YBX3-215ENST00000544504 SPATA46Q5T0L3 261 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 PLCXD3Q63HM9 321 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 MZT2AQ6P582 158 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 LINC00299Q6ZSB3 139 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 LHFPL2Q6ZUX7 228 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 C22orf34Q6ZV56 151 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 ZDHHC23Q8IYP9 409 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 PNLDC1Q8NA58 520 aaKnown RBP8.15□□□□□ -1.1
YBX3-215ENST00000544504 OR13C9Q8NGT0 318 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 PIGCQ92535 297 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 SORCS2Q96PQ0 1159 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 UQCC2Q9BRT2 126 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 PAPOLGQ9BWT3 736 aaKnown RBP8.15□□□□□ -1.1
YBX3-215ENST00000544504 MMP27Q9H306 513 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 TPK1Q9H3S4 243 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 RNF167Q9H6Y7 350 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 NKIRAS2Q9NYR9 191 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 HCFC1P51610 2035 aa8.15□□□□□ -1.11
YBX3-215ENST00000544504 HEATR1Q9H583 2144 aaKnown RBP8.14□□□□□ -1.11
YBX3-215ENST00000544504 AIPO00170 330 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 MAS1P04201 325 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 AZGP1P25311 298 aaKnown RBP8.14□□□□□ -1.11
YBX3-215ENST00000544504 CFPP27918 469 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 MAGEB1P43366 347 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 RBP2P50120 134 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 FABP6P51161 128 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 ATP1B3P54709 279 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 PSG7Q13046 419 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 HNRNPA0Q13151 305 aaKnown RBP8.14□□□□□ -1.11
YBX3-215ENST00000544504 RIN1Q13671 783 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 DAZAP2Q15038 168 aaPredicted RBP8.14□□□□□ -1.11
YBX3-215ENST00000544504 CEACAM21Q3KPI0 293 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 CEP78Q5JTW2 689 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 DDI2Q5TDH0 399 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 OR2T2Q6IF00 324 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 LRRTM1Q86UE6 522 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 OR8G5Q8NG78 346 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 OR5A2Q8NGI9 324 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 OR6M1Q8NGM8 313 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 OR13G1Q8NGZ3 307 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 OR8S1Q8NH09 359 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 TMEM171Q8WVE6 324 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 MRPL24Q96A35 216 aaKnown RBP8.14□□□□□ -1.11
YBX3-215ENST00000544504 BORCS8Q96FH0 119 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 DIRC2Q96SL1 478 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 GPER1Q99527 375 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 MICU1Q9BPX6 476 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 TMEM204Q9BSN7 226 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 SOX7Q9BT81 388 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 DCUN1D5Q9BTE7 237 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 RTL8AQ9BWD3 113 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 PPIL3Q9H2H8 161 aaKnown RBP8.14□□□□□ -1.11
YBX3-215ENST00000544504 POFUT1Q9H488 388 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 METTL17Q9H7H0 456 aaPredicted RBP8.14□□□□□ -1.11
YBX3-215ENST00000544504 PLGRKTQ9HBL7 147 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 CA10Q9NS85 328 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 TMEM100Q9NV29 134 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 C14orf119Q9NWQ9 140 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 CRIM1Q9NZV1 1036 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 ABRACLQ9P1F3 81 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 AK6Q9Y3D8 172 aaKnown RBP8.14□□□□□ -1.11
YBX3-215ENST00000544504 RHBDD3Q9Y3P4 386 aa8.14□□□□□ -1.11
YBX3-215ENST00000544504 IGLV3-9A0A075B6K5 115 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 A0A075B6Q4 140 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 TMEM210A6NLX4 147 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 IFITM5A6NNB3 132 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 ZNF850A8MQ14 1090 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 SLC17A2O00624 439 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 LMX1BO60663 402 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 CLPXO76031 633 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 CYB5AP00167 134 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 UBBP0CG47 229 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 CALCBP10092 127 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 CD37P11049 281 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 ANOS1P23352 680 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 TNFSF4P23510 183 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 APOBEC3AP31941 199 aaPredicted RBP8.13□□□□□ -1.11
YBX3-215ENST00000544504 S100A5P33763 92 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 ZNF93P35789 620 aaPredicted RBP8.13□□□□□ -1.11
YBX3-215ENST00000544504 ERVS71-1P61550 626 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 GNG3P63215 75 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 SPOCK1Q08629 439 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 PRDX4Q13162 271 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 TNK1Q13470 666 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 OR8G1Q15617 311 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 FAM189A2Q15884 450 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 RAB11BQ15907 218 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 DEFB113Q30KQ7 82 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 ZNF404Q494X3 552 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 C1orf100Q5SVJ3 147 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 ADAM5Q6NVV9 412 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 SFXN4Q6P4A7 337 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 VHLLQ6RSH7 139 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 MOB3CQ70IA8 216 aa8.13□□□□□ -1.11
YBX3-215ENST00000544504 JAGN1Q8N5M9 183 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms