RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 OR5D14Q8NGL3 314 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 OR13C5Q8NGS8 318 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 OR13C9Q8NGT0 318 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 OR10AC1Q8NH08 325 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 OR5P3Q8WZ94 311 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 THRSPQ92748 146 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 RPL3LQ92901 407 aaKnown RBP5.34□□□□□ -1.55
LTBR-212ENST00000543542 ERGIC1Q969X5 290 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 RNF166Q96A37 237 aaPredicted RBP5.34□□□□□ -1.55
LTBR-212ENST00000543542 ITPKCQ96DU7 683 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 ADAT3Q96EY9 351 aaPredicted RBP5.34□□□□□ -1.55
LTBR-212ENST00000543542 GPER1Q99527 375 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 MGLLQ99685 303 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 GAL3ST1Q99999 423 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 REG4Q9BYZ8 158 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 BPESC1Q9GZL8 116 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 ZCCHC4Q9H5U6 513 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 ACOT13Q9NPJ3 140 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 RNF7Q9UBF6 113 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 CKLFQ9UBR5 152 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 NPTNQ9Y639 398 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 SIRT4Q9Y6E7 314 aaPredicted RBP5.34□□□□□ -1.55
LTBR-212ENST00000543542 CHD3Q12873 2000 aaKnown RBP5.34□□□□□ -1.55
LTBR-212ENST00000543542 TANC2Q9HCD6 1990 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 ITPR2Q14571 2701 aa5.34□□□□□ -1.55
LTBR-212ENST00000543542 ROS1P08922 2347 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 PLCE1Q9P212 2302 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 PPIAL4EA0A075B759 164 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 A0A087WXM4 84 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 A0A1W2PPK0 400 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 LRP5LA4QPB2 252 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 PPIAL4DF5H284 164 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 C3orf80F5H4A9 247 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 PLPP2O43688 288 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 ZNF205O95201 554 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 PPIAL4FP0DN26 164 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 CD99P14209 185 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 ATF1P18846 271 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 RAB3AP20336 220 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 USF1P22415 310 aaPredicted RBP5.33□□□□□ -1.56
LTBR-212ENST00000543542 AZGP1P25311 298 aaKnown RBP5.33□□□□□ -1.56
LTBR-212ENST00000543542 CD80P33681 288 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 NR4A2P43354 598 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 GATA4P43694 442 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 HAAOP46952 286 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 POU3F4P49335 361 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 RBP2P50120 134 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 MTCP1P56278 107 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 BTG1P62324 171 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 EMX1Q04741 257 aaPredicted RBP5.33□□□□□ -1.56
LTBR-212ENST00000543542 ACSM1Q08AH1 577 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 MLLT11Q13015 90 aaPredicted RBP5.33□□□□□ -1.56
LTBR-212ENST00000543542 ZNF154Q13106 437 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 TRAM1Q15629 374 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 TBCEQ15813 527 aaPredicted RBP5.33□□□□□ -1.56
LTBR-212ENST00000543542 UBE2V2Q15819 145 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 NEDD8Q15843 81 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 Q499Y3 187 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 KCTD21Q4G0X4 260 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 ARMCX4Q5H9R4 360 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 ZNF826PQ6ZT77 177 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 LHFPL2Q6ZUX7 228 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 ZNF573Q86YE8 665 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 SPARTQ8N0X7 666 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 MUC20Q8N307 709 aaPredicted RBP5.33□□□□□ -1.56
LTBR-212ENST00000543542 MS4A15Q8N5U1 240 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 SCCPDHQ8NBX0 429 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 ZNF485Q8NCK3 441 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 MAPK1IP1LQ8NDC0 245 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 C19orf18Q8NEA5 215 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 DEFB108BQ8NET1 73 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 TSPAN14Q8NG11 270 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 ZNF671Q8TAW3 534 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 LRRC29Q8WV35 223 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 HPSE2Q8WWQ2 592 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 FCGR1BQ92637 280 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 TMEM203Q969S6 136 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 TMEM106AQ96A25 262 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 RFT1Q96AA3 541 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 CPNE2Q96FN4 548 aaPredicted RBP5.33□□□□□ -1.56
LTBR-212ENST00000543542 OPALINQ96PE5 141 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 OR14A2Q96R54 314 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 CHST5Q9GZS9 411 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 FAM192AQ9GZU8 254 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 SLITRK2Q9H156 845 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 ISYNA1Q9NPH2 558 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 TAS2R4Q9NYW5 299 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 DNAJB11Q9UBS4 358 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 POLDIP2Q9Y2S7 368 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 LSM2Q9Y333 95 aaKnown RBP5.33□□□□□ -1.56
LTBR-212ENST00000543542 WIPI2Q9Y4P8 454 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 PPIAL4AQ9Y536 164 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 ABCA12Q86UK0 2595 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 AKAP9Q99996 3911 aa5.33□□□□□ -1.56
LTBR-212ENST00000543542 IGHV3OR15-7A0A075B7D8 119 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 TRAV38-1A0A0B4J264 116 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 A0A1B0GWJ7 208 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 PQLC2LA1A4F0 135 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 ZNF879B4DU55 563 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 TRAPPC2LH3BP13 241 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms