RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 GTF2A1LQ9UNN4 478 aa12.86□□□□□ -0.35
ECHDC2-223ENST00000542552 IGHV2-70DA0A0C4DH43 119 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 KIR2DS1A0A191URI9 304 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 SNTNA6NMZ2 147 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 P2RY10O00398 339 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 FCN3O75636 299 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 GYPAP02724 150 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 PPIAL4GP0DN37 164 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 NPY4RP50391 375 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 GPM6AP51674 278 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 GNG3P63215 75 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 SCGB2A2Q13296 93 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 TUSC1Q2TAM9 212 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 CDONQ4KMG0 1287 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 CEP78Q5JTW2 689 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 KCTD20Q7Z5Y7 419 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 PRSS35Q8N3Z0 413 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 TMEM158Q8WZ71 300 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 C12orf43Q96C57 262 aaKnown RBP12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 LGALS12Q96DT0 336 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 SMPD3Q9NY59 655 aaPredicted RBP12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 PCDHGB1Q9Y5G3 927 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 AUP1Q9Y679 476 aa12.85□□□□□ -0.35
ECHDC2-223ENST00000542552 IGHV3OR15-7A0A075B7D8 119 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 OR5B21A6NL26 309 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 ZNF732B4DXR9 585 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 C22orf46C9J442 243 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 ADAM20O43506 726 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 TCF21O43680 179 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 NRASP01111 189 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 EPHA1P21709 976 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 ZNF91Q05481 1191 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 MICBQ29980 383 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 KRTAP24-1Q3LI83 254 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 TP53I3Q53FA7 332 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 KLF17Q5JT82 389 aaPredicted RBP12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 CLVS2Q5SYC1 327 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 ATPAF1Q5TC12 328 aaPredicted RBP12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 FDX2Q6P4F2 183 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 DOK3Q7L591 496 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 ACBD7Q8N6N7 88 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 SEH1LQ96EE3 360 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 Q96MT0 163 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 MRI1Q9BV20 369 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 SMURF1Q9HCE7 757 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 ACOXLQ9NUZ1 547 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 MRPS18AQ9NVS2 196 aaKnown RBP12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 ERVK-18Q9QC07 812 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 GNG8Q9UK08 70 aa12.84□□□□□ -0.35
ECHDC2-223ENST00000542552 A0A0A6YYJ9 748 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 DAPL1A0PJW8 107 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 RNF212BA8MTL3 300 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 IGHA1P01876 353 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 DBTP11182 482 aaKnown RBP12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 AMY2BP19961 511 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 KIR3DL2P43630 455 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 ELF3P78545 371 aaPredicted RBP12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 SRSF2Q01130 221 aaKnown RBP12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 RCN1Q15293 331 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 C11orf91Q3C1V1 193 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 DMRTC1Q5HYR2 192 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 WDR38Q5JTN6 314 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 CD276Q5ZPR3 534 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 PLCXD3Q63HM9 321 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 STUMQ69YW2 141 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 KCTD8Q6ZWB6 473 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 MOB3CQ70IA8 216 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 EGFL6Q8IUX8 553 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 PACRGLQ8N7B6 248 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 CCDC54Q8NEL0 328 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 SPATA3Q8NHX4 192 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 APH1BQ8WW43 257 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 AQP3Q92482 292 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 NUDT16L1Q9BRJ7 211 aaKnown RBP12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 ZNF649Q9BS31 505 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 WDR13Q9H1Z4 485 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 C8orf4Q9NR00 106 aa12.83□□□□□ -0.36
ECHDC2-223ENST00000542552 PQLC2LA1A4F0 135 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 WBP4O75554 376 aaKnown RBP12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 RHBDL1O75783 438 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 TGM4P49221 684 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 OR12D2P58182 307 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 LPCAT4Q643R3 524 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 BTNL3Q6UXE8 466 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 USP43Q70EL4 1123 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 FAM220AQ7Z4H9 259 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 PHC2Q8IXK0 858 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 OR2G2Q8NGZ5 317 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 UPRTQ96BW1 309 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 TECTBQ96PL2 329 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 CCL13Q99616 98 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 DNTTIP1Q9H147 329 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 RASSF4Q9H2L5 321 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 OCEL1Q9H607 264 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 MYRFQ9Y2G1 1151 aa12.82□□□□□ -0.36
ECHDC2-223ENST00000542552 A0A1B0GVI7 797 aa12.81□□□□□ -0.36
ECHDC2-223ENST00000542552 A0A1B0GW55 424 aa12.81□□□□□ -0.36
ECHDC2-223ENST00000542552 A6NIN4 97 aa12.81□□□□□ -0.36
ECHDC2-223ENST00000542552 ANKRD65E5RJM6 399 aa12.81□□□□□ -0.36
ECHDC2-223ENST00000542552 DVL1O14640 695 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms