RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 GTF2F2P13984 249 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 FBLP22087 321 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 FAUP35544 74 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 PSMB10P40306 273 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 AQP2P41181 271 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 RBM34P42696 430 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 ARL4DP49703 201 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 CCL7P80098 99 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 FHL1Q13642 323 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 VWA2Q5GFL6 755 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 STPG1Q5TH74 334 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 OLFML2AQ68BL7 652 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 NIPAL3Q6P499 406 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 C1orf210Q8IVY1 113 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 BAP18Q8IXM2 172 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 KCNRGQ8N5I3 272 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 HSD17B11Q8NBQ5 300 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 OR4C3Q8NH37 302 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC2A12Q8TD20 617 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 TMED6Q8WW62 240 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 HIST1H2BAQ96A08 127 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 CITED2Q99967 270 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 ALKBH7Q9BT30 221 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 LAT2Q9GZY6 243 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 UBQLN3Q9H347 655 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 PLEKHA1Q9HB21 404 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 NOX4Q9NPH5 578 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 CARHSP1Q9Y2V2 147 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 POMT1Q9Y6A1 747 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 LOC100509620A0A075B734 347 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 TRBV2A0A0J9YWF9 115 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 A0A1B0GWA3 101 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 CYB5BO43169 146 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 LAMTOR5O43504 91 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 ARR3P36575 388 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 C5orf24Q7Z6I8 188 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 RFLNBQ8N5W9 214 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC38A9Q8NBW4 561 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 INO80EQ8NBZ0 244 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 OR51L1Q8NGJ5 315 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 OR4A4PQ8NGN8 299 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 OR8U1Q8NH10 309 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 TMEM239Q8WW34 195 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 SAT2Q96F10 170 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 SEC11CQ9BY50 192 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 VN1R1Q9GZP7 353 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 COMMD4Q9H0A8 199 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 PRODH2Q9UF12 536 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 SERTAD3Q9UJW9 196 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 FBXO4Q9UKT5 387 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 FOXJ3Q9UPW0 622 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 RHBDD3Q9Y3P4 386 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 ADAM18Q9Y3Q7 739 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 ADAMTS9Q9P2N4 1935 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 IGLV3-12A0A075B6K2 115 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 IGHV5-10-1A0A0J9YXX1 117 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 A0A1B0GW15 77 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 IFITM10A6NMD0 228 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 PATE3B3GLJ2 98 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 MCIDASD6RGH6 385 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 IMPA2O14732 288 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF264O43296 627 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 YIF1AO95070 293 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 TIAF1O95411 115 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 ITPKBP27987 946 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 MAS1LP35410 378 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 MNDAP41218 407 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 PPICP45877 212 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 TAS2R20P59543 309 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 AIMP2Q13155 320 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC22A6Q4U2R8 563 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 C1orf189Q5VU69 101 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 RHBDD2Q6NTF9 364 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 C9orf40Q8IXQ3 194 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 OR10D4PQ8NGN7 298 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 OR2I1PQ8NGU4 316 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC46A1Q96NT5 459 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 C20orf24Q9BUV8 137 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 DPH1Q9BZG8 443 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 NXF5Q9H1B4 397 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 SIDT1Q9NXL6 827 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 OR14J1Q9UGF5 321 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 OR52A1Q9UKL2 312 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 NOP16Q9Y3C1 178 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 RBM7Q9Y580 266 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 YLPM1P49750 1951 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 ASXL3Q9C0F0 2248 aa7.09□□□□□ -1.27
PDLIM5-221ENST00000542407 TRAV1-2A0A0B4J238 106 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 A0A0B4J2A0 478 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 GGT3PA6NGU5 568 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 FRG2CA6NGY1 282 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 IFITM5A6NNB3 132 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF891A8MT65 544 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 J3QRE1 110 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 OR2F2O95006 317 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 SFTA3P0C7M3 94 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 EDNRAP25101 427 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 CRYBA4P53673 196 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 ATP1B3P54709 279 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 TAS2R43P59537 309 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms