RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ARL2P36404 184 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 MDH2P40926 338 aaKnown RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PNLIPRP1P54315 467 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 HMGCS2P54868 508 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 LILRA4P59901 499 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 BTN3A2P78410 334 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 DGCR2P98153 550 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 RUNX1Q01196 453 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 DLX2Q07687 328 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 ST3GAL3Q11203 375 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PCOLCEQ15113 449 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 MEP1BQ16820 701 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 IAH1Q2TAA2 248 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 QRICH1Q2TAL8 776 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 LINC00303Q3SY05 128 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 ZNF658BQ4V348 819 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 IFI44LQ53G44 452 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 ZNF385BQ569K4 471 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TMEM41BQ5BJD5 291 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TXNRD3NBQ6F5E7 133 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 SFRP4Q6FHJ7 346 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 MRPL54Q6P161 138 aaKnown RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 NPNTQ6UXI9 565 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 NHLRC1Q6VVB1 395 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 AMZ2Q86W34 360 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TMEM173Q86WV6 379 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 C4orf19Q8IY42 314 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 MUC20Q8N307 709 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 SLC5A8Q8N695 610 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PNPLA1Q8N8W4 532 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 OR10G3Q8NGC4 313 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 OR9K2Q8NGE7 335 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 STAG3L4Q8TBR4 150 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 SLC2A12Q8TD20 617 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TMEM170AQ8WVE7 144 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 SECTM1Q8WVN6 248 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TMEM239Q8WW34 195 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 FAM3CQ92520 227 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PSMF1Q92530 271 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 DYRK2Q92630 601 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TSLPQ969D9 159 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 MOAP1Q96BY2 351 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PPCDCQ96CD2 204 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 DDIT4LQ96D03 193 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 S100A16Q96FQ6 103 aaKnown RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 CAPNS2Q96L46 248 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PGLYRP2Q96PD5 576 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TSPAN32Q96QS1 320 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 NIPSNAP3BQ9BS92 247 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 CHRDL1Q9BU40 450 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 RAB11FIP5Q9BXF6 653 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 DPY30Q9C005 99 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 WDR13Q9H1Z4 485 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 OR10A2Q9H208 303 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TUBB1Q9H4B7 451 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PATZ1Q9HBE1 687 aaKnown RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TAF9BQ9HBM6 251 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 NGBQ9NPG2 151 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PXMP2Q9NR77 195 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TUBG2Q9NRH3 451 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 MRPL15Q9P015 296 aaKnown RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 ABI3Q9P2A4 366 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PTGFRNQ9P2B2 879 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 ZNF391Q9UJN7 358 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TRAPPC2LQ9UL33 140 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 RASD1Q9Y272 281 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 FIS1Q9Y3D6 152 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 NEUROG3Q9Y4Z2 214 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 HS3ST3A1Q9Y663 406 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 URGCP-MRPS24S4R325 110 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 LOC100509620A0A075B734 347 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TRAV38-1A0A0B4J264 116 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 OR6C6A6NF89 314 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF705FA8MVS1 300 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 HEPACAM2A8MVW5 462 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TISP43B9A030 160 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 B9A039 149 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 F8WDY8 70 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 M0QZ24 198 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 DCTN6O00399 190 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 RNASET2O00584 256 aaKnown RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 XKRYO14609 159 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 LATO43561 262 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 KLK8O60259 260 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF354AO60765 605 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 RAMP2O60895 175 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 WISP3O95389 354 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 SEMA4FO95754 770 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 HBZP02008 142 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 CSTBP04080 98 aaKnown RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 MMP2P08253 660 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 OR4A8P0C604 315 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 LINC00032P0C843 101 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF705DP0CH99 300 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF705BP0CI00 300 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 AKAIN1P0CW23 69 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 PPIAL4GP0DN37 164 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 CD99P14209 185 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 GYPEP15421 78 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 HOXB9P17482 250 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms