RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 ZNF629Q9UEG4 869 aaPredicted RBP11.89□□□□□ -0.51
PTPN1-202ENST00000541713 NSG1A0A0A6YYJ2 146 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 FSTP19883 344 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 ACKR3P25106 362 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 PPIAP62937 165 aaKnown RBP11.88□□□□□ -0.51
PTPN1-202ENST00000541713 TAGLNQ01995 201 aaKnown RBP11.88□□□□□ -0.51
PTPN1-202ENST00000541713 WDR74Q6RFH5 385 aaPredicted RBP11.88□□□□□ -0.51
PTPN1-202ENST00000541713 RPS19BP1Q86WX3 136 aaKnown RBP11.88□□□□□ -0.51
PTPN1-202ENST00000541713 MITD1Q8WV92 249 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 PAPOLGQ9BWT3 736 aaKnown RBP11.88□□□□□ -0.51
PTPN1-202ENST00000541713 RFNGQ9Y644 331 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 A0A0D9SG52 128 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 LRP3O75074 770 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 ISG15P05161 165 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 CRHP06850 196 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 UBBP0CG47 229 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 EDN3P14138 238 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 RGS19P49795 217 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 FGL1Q08830 312 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 C3AR1Q16581 482 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 RABEPKQ7Z6M1 372 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 MISPQ8IVT2 679 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 TMEM230Q96A57 120 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 FBXO17Q96EF6 278 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 ARPC5LQ9BPX5 153 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 UTP23Q9BRU9 249 aaKnown RBP11.88□□□□□ -0.51
PTPN1-202ENST00000541713 MGAQ8IWI9 3026 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 MED13Q9UHV7 2174 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 NUP210LQ5VU65 1888 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 PIEZO2Q9H5I5 2752 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 ABCD4O14678 606 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 C1QL1O75973 258 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 HTR5AP47898 357 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 KCNRGQ8N5I3 272 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 SRXN1Q9BYN0 137 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 P4HTMQ9NXG6 502 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 RASL12Q9NYN1 266 aa11.88□□□□□ -0.51
PTPN1-202ENST00000541713 CHCHD2Q9Y6H1 151 aaPredicted RBP11.88□□□□□ -0.51
PTPN1-202ENST00000541713 CCDC187A0A096LP49 1063 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 ACTL6AO96019 429 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 CD74P04233 296 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 ICAM2P13598 275 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 MSR1P21757 451 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 NTF4P34130 210 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 RPS27AP62979 156 aaKnown RBP11.87□□□□□ -0.51
PTPN1-202ENST00000541713 UBA52P62987 128 aaKnown RBP11.87□□□□□ -0.51
PTPN1-202ENST00000541713 PAN3Q58A45 887 aaKnown RBP11.87□□□□□ -0.51
PTPN1-202ENST00000541713 DNM1P46Q6ZS02 220 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 OR11L1Q8NGX0 322 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 FGFBP3Q8TAT2 258 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 ABHD3Q8WU67 409 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 PIGQQ9BRB3 760 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 SLC17A5Q9NRA2 495 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 TMEM14DPA8MWL7 114 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 KRBOX1C9JBD0 128 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 SULT1C2O00338 296 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 MTRF1O75570 445 aaKnown RBP11.87□□□□□ -0.51
PTPN1-202ENST00000541713 OR7C1O76099 320 aaPredicted RBP11.87□□□□□ -0.51
PTPN1-202ENST00000541713 FGF2P09038 288 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 ZNF616Q08AN1 781 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 SPIN3Q5JUX0 258 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 SPINK14Q6IE38 97 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 PRR18Q8N4B5 295 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 SEMA6DQ8NFY4 1073 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 OR5AP2Q8NGF4 316 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 OR56B1Q8NGI3 324 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 SLCO5A1Q9H2Y9 848 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 C19orf25Q9UFG5 118 aaPredicted RBP11.87□□□□□ -0.51
PTPN1-202ENST00000541713 DHHO43323 396 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 MED6O75586 246 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 FHITP49789 147 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 QRFPP83859 136 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 ZNF273Q14593 569 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 TGIF1Q15583 401 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 TRIM61Q5EBN2 209 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 HES7Q9BYE0 225 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 SHARPINQ9H0F6 387 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 FLVCR1Q9Y5Y0 555 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 AUP1Q9Y679 476 aa11.87□□□□□ -0.51
PTPN1-202ENST00000541713 CADP27708 2225 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 TRAV39A0A0B4J263 110 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 A8MXK9 166 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 GEMIN2O14893 280 aaKnown RBP11.86□□□□□ -0.51
PTPN1-202ENST00000541713 ATG12O94817 140 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 JMJD7P0C870 316 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 TCN2P20062 427 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 DHODHQ02127 395 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 TMEM128Q5BJH2 165 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 HAGHLQ6PII5 290 aaPredicted RBP11.86□□□□□ -0.51
PTPN1-202ENST00000541713 LINC00696Q6ZRV3 163 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 MOB3CQ70IA8 216 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 NECAB3Q96P71 396 aaPredicted RBP11.86□□□□□ -0.51
PTPN1-202ENST00000541713 RNF126Q9BV68 326 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 RAB33BQ9H082 229 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 ZNF442Q9H7R0 627 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 C14orf166Q9Y224 244 aaKnown RBP11.86□□□□□ -0.51
PTPN1-202ENST00000541713 RCL1Q9Y2P8 373 aaKnown RBP11.86□□□□□ -0.51
PTPN1-202ENST00000541713 FAM166BA8MTA8 275 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 C9J4A7 227 aa11.86□□□□□ -0.51
PTPN1-202ENST00000541713 BET1O15155 118 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms