RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 A0A1B0GTI1 187 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 PRRG2O14669 202 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 ARPC1BO15143 372 aaKnown RBP7.56□□□□□ -1.2
THBS3-210ENST00000541576 TNFSF13O75888 250 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 IL2RAP01589 272 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 CRHP06850 196 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 TMIGD3P0DMS9 266 aaPredicted RBP7.56□□□□□ -1.2
THBS3-210ENST00000541576 CD79AP11912 226 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 SLC6A1P30531 599 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 EIF2S3LQ2VIR3 472 aaKnown RBP7.56□□□□□ -1.2
THBS3-210ENST00000541576 OR52B4Q8NGK2 314 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 TRMT10AQ8TBZ6 339 aaKnown RBP7.56□□□□□ -1.2
THBS3-210ENST00000541576 BCL2L2Q92843 193 aaPredicted RBP7.56□□□□□ -1.2
THBS3-210ENST00000541576 KCTD12Q96CX2 325 aaKnown RBP7.56□□□□□ -1.2
THBS3-210ENST00000541576 DLL4Q9NR61 685 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 PROCRQ9UNN8 238 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 TMEM8BA6NDV4 472 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 ZNF503-AS2A6NEH8 195 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 ZNF98A6NK75 572 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 ANXA2P2A6NMY6 339 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 UBL3O95164 117 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 MAS1P04201 325 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 RLN1P04808 185 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 IGHV1-2P23083 117 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 TIMP3P35625 211 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 ARR3P36575 388 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 CLDN12P56749 244 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 RAB1AP62820 205 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 KLRB1Q12918 225 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 KRTAP27-1Q3LI81 207 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 LRRC37A5PQ49AS3 106 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 CLLU1Q5K131 121 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 DPPA2Q7Z7J5 298 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 RPRMLQ8N4K4 120 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 CPEB3Q8NE35 698 aaKnown RBP7.56□□□□□ -1.2
THBS3-210ENST00000541576 NANOS1Q8WY41 292 aaKnown RBP7.56□□□□□ -1.2
THBS3-210ENST00000541576 PLSCR4Q9NRQ2 329 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 ZNF275Q9NSD4 429 aaPredicted RBP7.56□□□□□ -1.2
THBS3-210ENST00000541576 GPR160Q9UJ42 338 aa7.56□□□□□ -1.2
THBS3-210ENST00000541576 ITPR1Q14643 2758 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 A0A0U1RQV5 110 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 ANXA7P20073 488 aaKnown RBP7.55□□□□□ -1.2
THBS3-210ENST00000541576 PITPNBP48739 271 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 HES5Q5TA89 166 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 DOK3Q7L591 496 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 STARD4Q96DR4 205 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 FAM71F1Q96KD3 344 aaPredicted RBP7.55□□□□□ -1.2
THBS3-210ENST00000541576 MICU1Q9BPX6 476 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 OR10A2Q9H208 303 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 PRORYQ9H606 182 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 EDARQ9UNE0 448 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 FOXJ3Q9UPW0 622 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 V9GY05 133 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 NBASA2RRP1 2371 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 IFITM5A6NNB3 132 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 RAD51DO75771 328 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 LYZL6O75951 148 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 LCATP04180 440 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 FAM157BP0CG42 384 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 FSTP19883 344 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 CCL1P22362 96 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 HGFACQ04756 655 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 NAXEQ8NCW5 288 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 FGGYQ96C11 551 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 NKX3-1Q99801 234 aaPredicted RBP7.55□□□□□ -1.2
THBS3-210ENST00000541576 GHITMQ9H3K2 345 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 NOX3Q9HBY0 568 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 TMEM138Q9NPI0 162 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 TAS2R4Q9NYW5 299 aa7.55□□□□□ -1.2
THBS3-210ENST00000541576 MEIS3P1A6NDR6 274 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 AIPO00170 330 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 GMDSO60547 372 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 SLC19A2O60779 497 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 PLP2Q04941 152 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 GSG1Q2KHT4 349 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 SNAI3Q3KNW1 292 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 DOLPP1Q86YN1 238 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 LIX1LQ8IVB5 337 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 OR51A2Q8NGJ7 313 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 OR1J2Q8NGS2 313 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 ADAT3Q96EY9 351 aaPredicted RBP7.54□□□□□ -1.2
THBS3-210ENST00000541576 LRRC46Q96FV0 321 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 SOSTQ9BQB4 213 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 OPN3Q9H1Y3 402 aaPredicted RBP7.54□□□□□ -1.2
THBS3-210ENST00000541576 CA10Q9NS85 328 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 POLEQ07864 2286 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 PCNX1Q96RV3 2341 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 TTLL8A6PVC2 850 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 CGAP01215 116 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 IGLV3-1P01715 115 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 COX5BP10606 129 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 ZNF20P17024 532 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 IGFBP3P17936 291 aaPredicted RBP7.54□□□□□ -1.2
THBS3-210ENST00000541576 CXCL2P19875 107 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 COX5AP20674 150 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 GNALP38405 381 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 RAD52P43351 418 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 UBE2NP61088 152 aaKnown RBP7.54□□□□□ -1.2
THBS3-210ENST00000541576 PLA1AQ53H76 456 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 CCDC36Q8IYA8 594 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms