RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 GPNMBQ14956 572 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 CLLU1OSQ5K130 101 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 SLCO4C1Q6ZQN7 724 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 EMCNQ9ULC0 261 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 MRPS16Q9Y3D3 137 aaKnown RBP13.87□□□□□ -0.19
HMGA2-210ENST00000541363 TMEM265A0A087WTH1 108 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 HIST1H1BP16401 226 aaKnown RBP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 SIX1Q15475 284 aaPredicted RBP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 ARIH2OSQ8N7S6 290 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 PERPQ96FX8 193 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 RAB40CQ96S21 281 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 MFRPQ9BY79 579 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 FAM208AQ9UK61 1670 aaKnown RBP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 ELOA3CA0A087WX78 387 aaPredicted RBP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 IGSF23A1L1A6 192 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 MFSD2BA6NFX1 497 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 FAHD2AQ96GK7 314 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 TAAR3PQ9P1P4 343 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 NUP214P35658 2090 aaPredicted RBP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 POM121BA6NF01 834 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 FADS6Q8N9I5 356 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 OR10V1Q8NGI7 309 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 ZNF519Q8TB69 540 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 SARGQ9BW04 601 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 OOEPA6NGQ2 149 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 K7EQS6 105 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 CD96P40200 585 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 HLA-DRB5Q30154 266 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 RBM45Q8IUH3 476 aaKnown RBP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 KTI12Q96EK9 354 aaPredicted RBP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 PACRGQ96M98 296 aaPredicted RBP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 IGHV3-15A0A0B4J1V0 119 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 PRSS37A4D1T9 235 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 IFITM5A6NNB3 132 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 PPP6CO00743 305 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 CD99P14209 185 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 CLDN15P56746 228 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 TIAL1Q01085 375 aaKnown RBP eCLIP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 HIST3H3Q16695 136 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 ZNF750Q32MQ0 723 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 SMUG1Q53HV7 270 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 ELFN2Q5R3F8 820 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 LINC00299Q6ZSB3 139 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 DPH3Q96FX2 82 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 CNTRLQ7Z7A1 2325 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 PPIHO43447 177 aaKnown RBP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 ORM2P19652 201 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 OR1L6Q8NGR2 347 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 RAB24Q969Q5 203 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 AUP1Q9Y679 476 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 WSB1Q9Y6I7 421 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 COL3A1P02461 1466 aaPredicted RBP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 SDK1Q7Z5N4 2213 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 SLC2A10O95528 541 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 RPS4Y1P22090 263 aaKnown RBP13.86□□□□□ -0.19
HMGA2-210ENST00000541363 HLA-BQ31612 363 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 OR2G2Q8NGZ5 317 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 PRR14Q9BWN1 585 aa13.86□□□□□ -0.19
HMGA2-210ENST00000541363 SLCO2B1O94956 709 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 NKAIN1Q4KMZ8 207 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 ST8SIA1Q92185 356 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 CMC2Q9NRP2 79 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 ZNF391Q9UJN7 358 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 ATF1P18846 271 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 ERVS71-1P61550 626 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 Q6ZNX1 250 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 VRK3Q8IV63 474 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 DYNLRB2Q8TF09 96 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 MICBQ29980 383 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 STAC2Q6ZMT1 411 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 MTURNQ8N3F0 131 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 SLC25A33Q9BSK2 321 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 HINT3Q9NQE9 182 aaKnown RBP13.85□□□□□ -0.19
HMGA2-210ENST00000541363 IL36GQ9NZH8 169 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 DOK5Q9P104 306 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 TMED3Q9Y3Q3 217 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 MBTPS2O43462 519 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 P01737 135 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 POLR2IP36954 125 aaKnown RBP13.85□□□□□ -0.19
HMGA2-210ENST00000541363 DUSP5Q16690 384 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 TRILQ7L0X0 811 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 TMEM99Q8N816 258 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 OR52B4Q8NGK2 314 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 LPAR5Q9H1C0 372 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 Q9N2K0 584 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 TMEM167BQ9NRX6 74 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 BCL7CQ8WUZ0 217 aaPredicted RBP13.85□□□□□ -0.19
HMGA2-210ENST00000541363 H7C2G1 150 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 ZNF865P0CJ78 1059 aaPredicted RBP13.85□□□□□ -0.19
HMGA2-210ENST00000541363 SLC6A1P30531 599 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 MDH2P40926 338 aaKnown RBP13.85□□□□□ -0.19
HMGA2-210ENST00000541363 HSF5Q4G112 596 aaPredicted RBP13.85□□□□□ -0.19
HMGA2-210ENST00000541363 ZNF841Q6ZN19 808 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 PHOSPHO2Q8TCD6 241 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 RSG1Q9BU20 258 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 ZNF552Q9H707 407 aaPredicted RBP13.85□□□□□ -0.19
HMGA2-210ENST00000541363 C20orf141Q9NUB4 165 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 TMEM140Q9NV12 185 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 ZFP30Q9Y2G7 519 aa13.85□□□□□ -0.19
HMGA2-210ENST00000541363 HS3ST3A1Q9Y663 406 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms