RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PARP16Q8N5Y8 322 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 DNAAF1Q8NEP3 725 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 OR10Z1Q8NGY1 313 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 RAB39BQ96DA2 213 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 CPNE2Q96FN4 548 aaPredicted RBP15.83■□□□□ 0.12
VPS33A-205ENST00000541169 ISYNA1Q9NPH2 558 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 PAK1IP1Q9NWT1 392 aaPredicted RBP15.83■□□□□ 0.12
VPS33A-205ENST00000541169 ERVK-18Q9QC07 812 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 DHDHQ9UQ10 334 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 WIPI2Q9Y4P8 454 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 A0A096LNT2 108 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 NDUFA2O43678 99 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 GTF2A1P52655 376 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-205ENST00000541169 SPRNQ5BIV9 151 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 KCTD8Q6ZWB6 473 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 LRRC28Q86X40 367 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-205ENST00000541169 SVOPQ8N4V2 548 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 ZNF671Q8TAW3 534 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 HPSE2Q8WWQ2 592 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 SPSB1Q96BD6 273 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 PDCD1LG2Q9BQ51 273 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 CCDC90BQ9GZT6 254 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 POLDIP2Q9Y2S7 368 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 CACNG2Q9Y698 323 aa15.82■□□□□ 0.12
VPS33A-205ENST00000541169 MAP1AP78559 2803 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-205ENST00000541169 PPIAL4EA0A075B759 164 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 ZNF732B4DXR9 585 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 PPIAL4DF5H284 164 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 IGHV2-70P01814 119 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 MT-ND2P03891 347 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 PPIAL4FP0DN26 164 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 GZMKP49863 264 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 GPM6AP51674 278 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 FUT6P51993 359 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 MPPED2Q15777 294 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 TBCEQ15813 527 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-205ENST00000541169 CEP78Q5JTW2 689 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 PRAMEF6Q5VXH4 476 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 MS4A15Q8N5U1 240 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 TSEN15Q8WW01 171 aaKnown RBP15.81■□□□□ 0.12
VPS33A-205ENST00000541169 GHSRQ92847 366 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 DVL3Q92997 716 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-205ENST00000541169 FGGYQ96C11 551 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 OR51I2Q9H344 312 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 UFSP2Q9NUQ7 469 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 C1orf123Q9NWV4 160 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 UBAP1Q9NZ09 502 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 PPIAL4AQ9Y536 164 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 LRRC42Q9Y546 428 aa15.81■□□□□ 0.12
VPS33A-205ENST00000541169 TRAV38-1A0A0B4J264 116 aa15.8■□□□□ 0.12
VPS33A-205ENST00000541169 hCG_1807616A0A1W2PRN6 198 aa15.8■□□□□ 0.12
VPS33A-205ENST00000541169 PQLC2LA1A4F0 135 aa15.8■□□□□ 0.12
VPS33A-205ENST00000541169 OCM2P0CE71 109 aa15.8■□□□□ 0.12
VPS33A-205ENST00000541169 OCMP0CE72 109 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-205ENST00000541169 MUC1P15941 1255 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-205ENST00000541169 MAPK3P27361 379 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-205ENST00000541169 THBS2P35442 1172 aa15.8■□□□□ 0.12
VPS33A-205ENST00000541169 MED22Q15528 200 aa15.8■□□□□ 0.12
VPS33A-205ENST00000541169 XAF1Q6GPH4 301 aa15.8■□□□□ 0.12
VPS33A-205ENST00000541169 ZNF420Q8TAQ5 688 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-205ENST00000541169 C12orf43Q96C57 262 aaKnown RBP15.8■□□□□ 0.12
VPS33A-205ENST00000541169 TREM2Q9NZC2 230 aa15.8■□□□□ 0.12
VPS33A-205ENST00000541169 LSM2Q9Y333 95 aaKnown RBP15.8■□□□□ 0.12
VPS33A-205ENST00000541169 IGHV4-61A0A0C4DH41 118 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 LHBP01229 141 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 ACAA1P09110 424 aaPredicted RBP15.79■□□□□ 0.12
VPS33A-205ENST00000541169 CELP19835 753 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 TRAM1Q15629 374 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 TMEM249Q2WGJ8 235 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 Q499Y3 187 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 WDR82Q6UXN9 313 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 SCCPDHQ8NBX0 429 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 FCGR1BQ92637 280 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 ADAT3Q96EY9 351 aaPredicted RBP15.79■□□□□ 0.12
VPS33A-205ENST00000541169 BORCS8Q96FH0 119 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 GAL3ST1Q99999 423 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 PKIBQ9C010 78 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 ZCCHC4Q9H5U6 513 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 GPR173Q9NS66 373 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 RASL12Q9NYN1 266 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 CKLFQ9UBR5 152 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 PCDHB10Q9UN67 800 aa15.79■□□□□ 0.12
VPS33A-205ENST00000541169 FLNAP21333 2647 aaKnown RBP15.79■□□□□ 0.12
VPS33A-205ENST00000541169 ISPDA4D126 451 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 J3QT63 122 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 LGALS8O00214 317 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 CDIPTO14735 213 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 SMAD7O15105 426 aaKnown RBP15.78■□□□□ 0.12
VPS33A-205ENST00000541169 MAGEB3O15480 346 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 LALBAP00709 142 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 ATF1P18846 271 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 PSMA1P25786 263 aaKnown RBP15.78■□□□□ 0.12
VPS33A-205ENST00000541169 PMELP40967 661 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 RBP2P50120 134 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 ATP1B3P54709 279 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 ZMYND11Q15326 602 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 UBE2V2Q15819 145 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 KCTD21Q4G0X4 260 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 CYB5R2Q6BCY4 276 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 LHFPL2Q6ZUX7 228 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms