RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 NANOS1Q8WY41 292 aaKnown RBP10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 SLX1AQ9BQ83 275 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 MARVELD1Q9BSK0 173 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 SELENOIQ9C0D9 397 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 ASF1BQ9NVP2 202 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 ZNF391Q9UJN7 358 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 TINAGQ9UJW2 476 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 KCNK7Q9Y2U2 307 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 TRAV6A0A075B6T7 132 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 FOXI3A8MTJ6 420 aaPredicted RBP10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 SSX5O60225 188 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 TPPPO94811 219 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 CNOT4O95628 575 aaKnown RBP10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 ALDH3B1P43353 468 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 TGFBR3Q03167 851 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 SNTB2Q13425 540 aaKnown RBP10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 DYRK1AQ13627 763 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 PCGF3Q3KNV8 242 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 CDNFQ49AH0 187 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 MRPL21Q7Z2W9 205 aaKnown RBP10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 DPPA2Q7Z7J5 298 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 CALHM1Q8IU99 346 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 CHST4Q8NCG5 386 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 BHLHE23Q8NDY6 225 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 OR10R2Q8NGX6 335 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 NUDCD2Q8WVJ2 157 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 HPS1Q92902 700 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 TMEM59Q9BXS4 323 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 FLVCR2Q9UPI3 526 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 ALG5Q9Y673 324 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 FIGNL2A6NMB9 653 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 SMPD2O60906 423 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 TCRBP04435 133 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 MGMTP16455 207 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 CEACAM8P31997 349 aaPredicted RBP10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 PRDX4Q13162 271 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 TATDN3Q17R31 274 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 ALKBH6Q3KRA9 238 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 FJX1Q86VR8 437 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 KCNG3Q8TAE7 436 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 PHF21AQ96BD5 680 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 SPSB1Q96BD6 273 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 PAPOLGQ9BWT3 736 aaKnown RBP10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 CACNG6Q9BXT2 260 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 NUDT15Q9NV35 164 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 KCNN3Q9UGI6 736 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 SH3BGRL2Q9UJC5 107 aa10.55□□□□□ -0.72
AP003559.1-201ENST00000540906 TLN1Q9Y490 2541 aaKnown RBP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 A0A0A6YYH2 397 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 METTL21EPA6NDL7 271 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 A6NJ64 397 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 CD300LBA8K4G0 201 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 A8MV72 311 aaPredicted RBP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 INMT-MINDY4F8WBC2 141 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 HNRNPCP07910 306 aaKnown RBP eCLIP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 TMEM225BP0DP42 221 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 CBR1P16152 277 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 IL32P24001 234 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 TIMP3P35625 211 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 RPS27AP62979 156 aaKnown RBP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 MALLQ13021 153 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 CNN3Q15417 329 aaKnown RBP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 OR2T2Q6IF00 324 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 BHLHA15Q7RTS1 189 aaPredicted RBP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 GVQW1Q8N7I0 195 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 PNLDC1Q8NA58 520 aaKnown RBP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 KDF1Q8NAX2 398 aaPredicted RBP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 OR4C16Q8NGL9 310 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 OR8S1Q8NH09 359 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 CHAC2Q8WUX2 184 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 BORCS8Q96FH0 119 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 BOD1Q96IK1 185 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 ARHGAP5-AS1Q96IT6 56 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 RADILQ96JH8 1075 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 ELL3Q9HB65 397 aaPredicted RBP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 MSTNO14793 375 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 RBBP9O75884 186 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 IL2RAP01589 272 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 IGKV3-15P01624 115 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 CD3DP04234 171 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 LPLP06858 475 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 PRKACBP22694 351 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 RBP2P50120 134 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 CAPZA1P52907 286 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 DAZAP2Q15038 168 aaPredicted RBP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 ST3GAL2Q16842 350 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 TBC1D28Q2M2D7 210 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 GFRALQ6UXV0 394 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 ASCL4Q6XD76 172 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 C22orf34Q6ZV56 151 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 FAM89BQ8N5H3 189 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 C1orf162Q8NEQ5 155 aaPredicted RBP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 OR4S1Q8NGB4 309 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 HS3ST6Q96QI5 342 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 C7orf50Q9BRJ6 194 aaKnown RBP10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 BEX2Q9BXY8 128 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 DPAGT1Q9H3H5 408 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 BEX1Q9HBH7 125 aa10.54□□□□□ -0.72
AP003559.1-201ENST00000540906 NEK6Q9HC98 313 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms