RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 RAB9AP51151 201 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 KLF3P57682 345 aaPredicted RBP1.26□□□□□ -2.21
MDM2-227ENST00000540709 ADIGQ0VDE8 80 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 TPBGQ13641 420 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 OR1Q1Q15612 314 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 CCL15Q16663 113 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 ALKBH6Q3KRA9 238 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 BZW1Q7L1Q6 419 aaKnown RBP1.26□□□□□ -2.21
MDM2-227ENST00000540709 SLC30A8Q8IWU4 369 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 Q8NDZ9 215 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 OR5AR1Q8NGP9 310 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 ITFG1Q8TB96 612 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 NRGNQ92686 78 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 OTUB2Q96DC9 234 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 NAP1L5Q96NT1 182 aaPredicted RBP1.26□□□□□ -2.21
MDM2-227ENST00000540709 CSPG4P5Q96PW8 444 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 PEBP4Q96S96 227 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 MYCBPQ99417 103 aaPredicted RBP1.26□□□□□ -2.21
MDM2-227ENST00000540709 MS4A8Q9BY19 250 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 GEMIN7Q9H840 131 aaKnown RBP1.26□□□□□ -2.21
MDM2-227ENST00000540709 NMRK1Q9NWW6 199 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 PTTG3PQ9NZH4 202 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 IGKV1-6A0A0C4DH72 117 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 A0A1W2PRD5 423 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 CCDC169A6NNP5 214 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 C3orf84H3BNL1 204 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 BCKDKO14874 412 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 CTNSO60931 367 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 FCN3O75636 299 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 CPSF4O95639 269 aaKnown RBP1.25□□□□□ -2.21
MDM2-227ENST00000540709 KRT16P08779 473 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 OR5AC1P0C628 307 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 GABRG2P18507 467 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 FUSP35637 526 aaKnown RBP eCLIP1.25□□□□□ -2.21
MDM2-227ENST00000540709 ZNF33AQ06730 810 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 FMODQ06828 376 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 INCA1Q0VD86 236 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 CUL2Q13617 745 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 IDI1Q13907 227 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 KLHL40Q2TBA0 621 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 LDLRAD2Q5SZI1 272 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 STEAP4Q687X5 459 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 METAP1DQ6UB28 335 aaPredicted RBP1.25□□□□□ -2.21
MDM2-227ENST00000540709 FA2HQ7L5A8 372 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 APRG1Q8IVJ8 170 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 CPNE9Q8IYJ1 553 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 OR56A4Q8NGH8 313 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 OR4D6Q8NGJ1 314 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 OR8K3Q8NH51 312 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 OR51F2Q8NH61 342 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 RBPMSQ93062 196 aaKnown RBP1.25□□□□□ -2.21
MDM2-227ENST00000540709 C9orf72Q96LT7 481 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 NAPGQ99747 312 aaPredicted RBP1.25□□□□□ -2.21
MDM2-227ENST00000540709 DSN1Q9H410 356 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 VSIRQ9H7M9 311 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 ZC4H2Q9NQZ6 224 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 NDRG2Q9UN36 371 aaKnown RBP1.25□□□□□ -2.21
MDM2-227ENST00000540709 ZNF257Q9Y2Q1 563 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 TRAPPC1Q9Y5R8 145 aa1.25□□□□□ -2.21
MDM2-227ENST00000540709 PLXNB1O43157 2135 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 IGLV10-54A0A075B6I4 117 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 PSCAO43653 123 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 ERLIN1O75477 346 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 LCA5LO95447 670 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 TDP2O95551 362 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 IGKV1-39P01597 117 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 IGKV1D-39P04432 117 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 SNRPAP09012 282 aaKnown RBP1.24□□□□□ -2.21
MDM2-227ENST00000540709 PRPS1L1P21108 318 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 UBE2MP61081 183 aaKnown RBP1.24□□□□□ -2.21
MDM2-227ENST00000540709 SLC9A3R2Q15599 337 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 PDZD11Q5EBL8 140 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 LIN9Q5TKA1 542 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 THOC7Q6I9Y2 204 aaKnown RBP1.24□□□□□ -2.21
MDM2-227ENST00000540709 BBS5Q8N3I7 341 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 ORAOV1Q8WV07 137 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 SMARCD1Q96GM5 515 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 OPALINQ96PE5 141 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 SCGB3A2Q96PL1 93 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 PANX1Q96RD7 426 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 CLSTN2Q9H4D0 955 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 RAB20Q9NX57 234 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 RABL2BQ9UNT1 228 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 ENPP4Q9Y6X5 453 aa1.24□□□□□ -2.21
MDM2-227ENST00000540709 MROH7Q68CQ1 1323 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 IGHV6-1A0A0B4J1U7 121 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 C9JQL5 133 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 H3BQ85 93 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 HMMRO75330 724 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 FARS2O95363 451 aaKnown RBP1.23□□□□□ -2.21
MDM2-227ENST00000540709 CBR1P16152 277 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 HLA-GP17693 338 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 SLC1A2P43004 574 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 RAB11AP62491 216 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 GRB2P62993 217 aaKnown RBP1.23□□□□□ -2.21
MDM2-227ENST00000540709 IL5RAQ01344 420 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 RAD51Q06609 339 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 LGALSLQ3ZCW2 172 aaPredicted RBP1.23□□□□□ -2.21
MDM2-227ENST00000540709 TMEM53Q6P2H8 277 aa1.23□□□□□ -2.21
MDM2-227ENST00000540709 WDR59Q6PJI9 974 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms