RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 C1orf100Q5SVJ3 147 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 VHLLQ6RSH7 139 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 RNF144BQ7Z419 303 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 COMMD2Q86X83 199 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 CLVS1Q8IUQ0 354 aaPredicted RBP8.95□□□□□ -0.98
VPS33A-204ENST00000540669 ZDHHC23Q8IYP9 409 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 NKAIN3Q8N8D7 197 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 BHLHE23Q8NDY6 225 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 OR13C9Q8NGT0 318 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 NINJ1Q92982 152 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 KCTD7Q96MP8 289 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 DIRC2Q96SL1 478 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 PAPOLGQ9BWT3 736 aaKnown RBP8.95□□□□□ -0.98
VPS33A-204ENST00000540669 TMEM138Q9NPI0 162 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 BATF3Q9NR55 127 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 SNTG1Q9NSN8 517 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 NDUFA13Q9P0J0 144 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 TAAR3PQ9P1P4 343 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 POU2F3Q9UKI9 436 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 SSR3Q9UNL2 185 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 NOP16Q9Y3C1 178 aaKnown RBP8.95□□□□□ -0.98
VPS33A-204ENST00000540669 LOC100289279A0A1B0GTE1 492 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 A6NIN4 97 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 TMEM210A6NLX4 147 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 ANKRD30BLA7E2S9 258 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 ZNF850A8MQ14 1090 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 H0YL77 283 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 NCR1O76036 304 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 NRASP01111 189 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 IL1AP01583 271 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 ACAA1P09110 424 aaPredicted RBP8.94□□□□□ -0.98
VPS33A-204ENST00000540669 NAT2P11245 290 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 ZNF20P17024 532 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 SRMP19623 302 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 CA6P23280 308 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 CALRP27797 417 aaKnown RBP8.94□□□□□ -0.98
VPS33A-204ENST00000540669 CFHR2P36980 270 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 ZNF154Q13106 437 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 SPCS2Q15005 226 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 CNN3Q15417 329 aaKnown RBP8.94□□□□□ -0.98
VPS33A-204ENST00000540669 MOGQ16653 247 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 SPRNQ5BIV9 151 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 ASCL4Q6XD76 172 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 TPRA1Q86W33 373 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 C11orf53Q8IXP5 236 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 SPERTQ8NA61 448 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 Q8NFD4 153 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 OR10AD1Q8NGE0 317 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 OR5A2Q8NGI9 324 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 OR5D14Q8NGL3 314 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 OR13G1Q8NGZ3 307 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 Q8TCH9 128 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 DYNC2LI1Q8TCX1 351 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 DVL3Q92997 716 aaPredicted RBP8.94□□□□□ -0.98
VPS33A-204ENST00000540669 C12orf43Q96C57 262 aaKnown RBP8.94□□□□□ -0.98
VPS33A-204ENST00000540669 OR51I2Q9H344 312 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 METTL17Q9H7H0 456 aaPredicted RBP8.94□□□□□ -0.98
VPS33A-204ENST00000540669 MSL2Q9HCI7 577 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 GPR173Q9NS66 373 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 FAIMQ9NVQ4 179 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 ZDHHC8Q9ULC8 765 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 USF3Q68DE3 2245 aa8.94□□□□□ -0.98
VPS33A-204ENST00000540669 SETXQ7Z333 2677 aaKnown RBP8.94□□□□□ -0.98
VPS33A-204ENST00000540669 A0A1W2PPK0 400 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 A0A1W2PPW3 197 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 TMEM127O75204 238 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 RAB3AP20336 220 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 PRKACBP22694 351 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 BDKRB2P30411 391 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 ZNF81P51508 661 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 FUT6P51993 359 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 VBP1P61758 197 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 GNG3P63215 75 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 TESK1Q15569 626 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 PCGF3Q3KNV8 242 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 AGAP6Q5VW22 663 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 PLCXD3Q63HM9 321 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 FBXL14Q8N1E6 418 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 OR52N4Q8NGI2 321 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 NDNFQ8TB73 568 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 SLC25A28Q96A46 364 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 SLC25A46Q96AG3 418 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 MEGF10Q96KG7 1140 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 UQCC2Q9BRT2 126 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 BARHL1Q9BZE3 327 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 PKIBQ9C010 78 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 FAM192AQ9GZU8 254 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 TMEM100Q9NV29 134 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 ZNF701Q9NV72 531 aaPredicted RBP8.93□□□□□ -0.98
VPS33A-204ENST00000540669 IL19Q9UHD0 177 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 DUSP13Q9UII6 198 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 GSTK1Q9Y2Q3 226 aa8.93□□□□□ -0.98
VPS33A-204ENST00000540669 MAP1AP78559 2803 aaPredicted RBP8.93□□□□□ -0.98
VPS33A-204ENST00000540669 LOC100506127A0A0U1RQW1 187 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 LRP5LA4QPB2 252 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 MEGF11A6BM72 1044 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 VSTM5A8MXK1 200 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 F5H5P2 479 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms