RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 C5orf49A4QMS7 147 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 SSX5O60225 188 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 CSN2P05814 226 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 VSIG10L2P0DP72 767 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 TBPP20226 339 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 CPT2P23786 658 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 MPGP29372 298 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 RBP2P50120 134 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 ARFRP1Q13795 201 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 ZMYND11Q15326 602 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 OR8B8Q15620 311 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 NKPD1Q17RQ9 610 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 PLAC9Q5JTB6 97 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 FBXW9Q5XUX1 488 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 SLC36A1Q7Z2H8 476 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 FAM89BQ8N5H3 189 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 GVQW1Q8N7I0 195 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 NANOS1Q8WY41 292 aaKnown RBP12.9□□□□□ -0.34
TSFM-207ENST00000540550 SPSB4Q96A44 273 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 GMPPAQ96IJ6 420 aaPredicted RBP12.9□□□□□ -0.34
TSFM-207ENST00000540550 ARHGAP5-AS1Q96IT6 56 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 KCNN3Q9UGI6 736 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 KCNK7Q9Y2U2 307 aa12.9□□□□□ -0.34
TSFM-207ENST00000540550 TMEM82A0PJX8 343 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 RGS13O14921 159 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 ZNF735P0CB33 412 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 CBX5P45973 191 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 ATP1B3P54709 279 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 ZP1P60852 638 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 RAB1AP62820 205 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 MALLQ13021 153 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 CAMK2BQ13554 666 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 RSU1Q15404 277 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 SF3B4Q15427 424 aaKnown RBP eCLIP12.9□□□□□ -0.35
TSFM-207ENST00000540550 C4orf46Q504U0 113 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 ZBTB37Q5TC79 503 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 PLCXD3Q63HM9 321 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 TMEM42Q69YG0 159 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 OR52W1Q6IF63 320 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 COLCA1Q6ZS62 124 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 MOB3CQ70IA8 216 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 SPICQ8N5J4 248 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 ASCC1Q8N9N2 400 aaKnown RBP12.9□□□□□ -0.35
TSFM-207ENST00000540550 SLC6A7Q99884 636 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 POFUT1Q9H488 388 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 GLRX2Q9NS18 164 aa12.9□□□□□ -0.35
TSFM-207ENST00000540550 MFNGO00587 321 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 CEACAM4O75871 244 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 CSTBP04080 98 aaKnown RBP12.89□□□□□ -0.35
TSFM-207ENST00000540550 IFNA6P05013 189 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 BLVRBP30043 206 aaPredicted RBP12.89□□□□□ -0.35
TSFM-207ENST00000540550 OR3A2P47893 321 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 FUT6P51993 359 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 ARL6IP1Q15041 203 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 RTN4RL2Q86UN3 420 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 CD163Q86VB7 1156 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 ZADH2Q8N4Q0 377 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 OR52B4Q8NGK2 314 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 OR1K1Q8NGR3 316 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 PIGCQ92535 297 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 APOBEC3DQ96AK3 386 aaPredicted RBP12.89□□□□□ -0.35
TSFM-207ENST00000540550 TM2D1Q9BX74 207 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 SLA2Q9H6Q3 261 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 KCNMB2Q9Y691 235 aa12.89□□□□□ -0.35
TSFM-207ENST00000540550 TNRC6AQ8NDV7 1962 aaKnown RBP12.89□□□□□ -0.35
TSFM-207ENST00000540550 ZNF503-AS2A6NEH8 195 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 AQP7O14520 342 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 SS18L1O75177 396 aaPredicted RBP12.88□□□□□ -0.35
TSFM-207ENST00000540550 HTR3BO95264 441 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 PLATP00750 562 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 MPZP25189 248 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 HRH1P35367 487 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 TMEM50BP56557 158 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 CXADRP78310 365 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 ACTBL2Q562R1 376 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 NLRC3Q7RTR2 1065 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 ASCL5Q7RTU5 278 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 MRPL21Q7Z2W9 205 aaKnown RBP12.88□□□□□ -0.35
TSFM-207ENST00000540550 TMED4Q7Z7H5 227 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 OR4K15Q8NH41 348 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 ZNF431Q8TF32 576 aaPredicted RBP12.88□□□□□ -0.35
TSFM-207ENST00000540550 TRIB1Q96RU8 372 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 DLL4Q9NR61 685 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 SLC2A8Q9NY64 477 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 EIF3KQ9UBQ5 218 aaKnown RBP12.88□□□□□ -0.35
TSFM-207ENST00000540550 NPTNQ9Y639 398 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 MED12LQ86YW9 2145 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 PROB1E7EW31 1015 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 SPRY1O43609 319 aaPredicted RBP12.88□□□□□ -0.35
TSFM-207ENST00000540550 CCL2P13500 99 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 APLNRP35414 380 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 HIKESHIQ53FT3 197 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 RTL6Q6ICC9 239 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 SARAFQ96BY9 339 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 CHIAQ9BZP6 476 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 ALX4Q9H161 411 aaPredicted RBP12.88□□□□□ -0.35
TSFM-207ENST00000540550 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.88□□□□□ -0.35
TSFM-207ENST00000540550 CLCF1Q9UBD9 225 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 MGAT4AQ9UM21 535 aa12.88□□□□□ -0.35
TSFM-207ENST00000540550 HSPB11Q9Y547 144 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms