RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 LINC01387J3KSC0 135 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 CCL21O00585 134 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 SELEP16581 610 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 SP6Q3SY56 376 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 TMPRSS7Q7RTY8 843 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 UBE3DQ7Z6J8 389 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 OR5AP2Q8NGF4 316 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 OR2V1Q8NHB1 315 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 MAP6Q96JE9 813 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 CMTM3Q96MX0 182 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 TPPP3Q9BW30 176 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 H3BMH7 237 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 H3BP45 60 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 MPZL1O95297 269 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 GABRA4P48169 554 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 LSM11P83369 360 aaKnown RBP eCLIP12.99□□□□□ -0.33
CACNB1-206ENST00000539338 ISXQ2M1V0 245 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 LSRQ86X29 649 aaPredicted RBP12.99□□□□□ -0.33
CACNB1-206ENST00000539338 RXFP4Q8TDU9 374 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 SLC39A7Q92504 469 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 KCNIP2Q9NS61 270 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 MRPL22Q9NWU5 206 aaKnown RBP12.99□□□□□ -0.33
CACNB1-206ENST00000539338 MTFP1Q9UDX5 166 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 STRAPQ9Y3F4 350 aaKnown RBP12.99□□□□□ -0.33
CACNB1-206ENST00000539338 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 TRIOBPQ9H2D6 2365 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 CTAG2O75638 210 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 THBS4P35443 961 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 DSCR4P56555 118 aaPredicted RBP12.98□□□□□ -0.33
CACNB1-206ENST00000539338 GSG1Q2KHT4 349 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 WIPI1Q5MNZ9 446 aaPredicted RBP12.98□□□□□ -0.33
CACNB1-206ENST00000539338 SLC23A3Q6PIS1 610 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 BSCL2Q96G97 398 aaPredicted RBP12.98□□□□□ -0.33
CACNB1-206ENST00000539338 ARHGAP5-AS1Q96IT6 56 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 ADAM19Q9H013 955 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 MTCH1Q9NZJ7 389 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 SERPINE3A8MV23 424 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 PATE3B3GLJ2 98 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 GPR12P47775 334 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 PNLIPRP3Q17RR3 467 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF425Q6IV72 752 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 C20orf196Q8IYI0 205 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 FOXB1Q99853 325 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 KCNK15Q9H427 330 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 CRYAAP02489 173 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 GPM6AP51674 278 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 FXNQ16595 210 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 NHLRC1Q6VVB1 395 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 TMEM171Q8WVE6 324 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 DLL4Q9NR61 685 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 RCL1Q9Y2P8 373 aaKnown RBP12.98□□□□□ -0.33
CACNB1-206ENST00000539338 SBF2Q86WG5 1849 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 NAA40Q86UY6 237 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 OR52N4Q8NGI2 321 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 LHX4Q969G2 390 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 RGPD4Q7Z3J3 1758 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 NINQ8N4C6 2090 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 EPPINO95925 133 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF883P0CG24 379 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 CTLA4P16410 223 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 CD96P40200 585 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 FABP6P51161 128 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 LRRTM1Q86UE6 522 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 OR11G2Q8NGC1 345 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 OR4F5Q8NH21 305 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 RPUSD4Q96CM3 377 aaKnown RBP12.98□□□□□ -0.33
CACNB1-206ENST00000539338 OR4F4Q96R69 305 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 SHARPINQ9H0F6 387 aa12.98□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF727A8MUV8 499 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 H7BYZ3 331 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 ACSM4P0C7M7 580 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 AKR1C3P42330 323 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 SSTP61278 116 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 OR1C1Q15619 314 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CDONQ4KMG0 1287 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 ARRDC1Q8N5I2 433 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 PP6455Q8WZ26 134 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 MARVELD1Q9BSK0 173 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 ARID1AO14497 2285 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CLN5O75503 358 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CT45A6P0DMU7 189 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CT45A5P0DMU8 189 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CT45A7P0DMV0 189 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CT45A8P0DMV1 189 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CT45A9P0DMV2 189 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 FLI1Q01543 452 aaPredicted RBP12.97□□□□□ -0.33
CACNB1-206ENST00000539338 HES1Q14469 280 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CT45A2Q5DJT8 189 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CT45A1Q5HYN5 189 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CLLU1Q5K131 121 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 OR1F12Q8NHA8 337 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CT45A3Q8NHU0 189 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 TGIF2Q9GZN2 237 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 ESRP2Q9H6T0 727 aaKnown RBP12.97□□□□□ -0.33
CACNB1-206ENST00000539338 PPP5D1E7EU14 171 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 PDGFBP01127 241 aaPredicted RBP12.97□□□□□ -0.33
CACNB1-206ENST00000539338 TMEM11P17152 192 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 FUT6P51993 359 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 DHRS2Q13268 280 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 PPP1R1AQ13522 171 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms