RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 LOC107986453A0A1B0GWG9 222 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 CCDC160A6NGH7 325 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 GGT3PA6NGU5 568 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 OR4C45A6NMZ5 311 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 ALX3O95076 343 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 ZFPL1O95159 310 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 NGFP01138 241 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 TFAP2AP05549 437 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 CD2P06729 351 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 ERCC1P07992 297 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 GABRA5P31644 462 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 LIPAP38571 399 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 SELENOVP59797 346 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 ZNF718Q3SXZ3 478 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 YIF1BQ5BJH7 314 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 GLYATL3Q5SZD4 288 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 SPATA46Q5T0L3 261 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 PGAP1Q75T13 922 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 DOK3Q7L591 496 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 ZNF101Q8IZC7 436 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 CCDC54Q8NEL0 328 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 OR13C3Q8NGS6 347 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 GPR148Q8TDV2 347 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 THRSPQ92748 146 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 TMEM203Q969S6 136 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 PPP1R14AQ96A00 147 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 NDUFB11Q9NX14 153 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 SSR3Q9UNL2 185 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 DHDHQ9UQ10 334 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 STARD10Q9Y365 291 aa10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 SIRT4Q9Y6E7 314 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-208ENST00000538933 HLA-DPB1P04440 258 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 CD1AP06126 327 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 OCM2P0CE71 109 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 OCMP0CE72 109 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 SELEP16581 610 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 ZNF20P17024 532 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 NR4A1P22736 598 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 TUBG1P23258 451 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 PRTN3P24158 256 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 MAPK3P27361 379 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 GPR6P46095 362 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 SOX2P48431 317 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 ALDH3B2P48448 385 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 RPS25P62851 125 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 BLMHQ13867 455 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 PRSS45Q7RTY3 260 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 SATL1Q86VE3 508 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 RDH10Q8IZV5 341 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 BPIFB2Q8N4F0 458 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 SLC25A40Q8TBP6 338 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 C22orf15Q8WYQ4 148 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 TAF15Q92804 592 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 TMIGD2Q96BF3 282 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 SGK3Q96BR1 496 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 OR2J1Q9GZK6 312 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 TPK1Q9H3S4 243 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 TUBG2Q9NRH3 451 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 OPN4Q9UHM6 478 aa10.54□□□□□ -0.72
CLSTN3-208ENST00000538933 LOC100506127A0A0U1RQW1 187 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 ICMTO60725 284 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 DHRS3O75911 302 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 HPXP02790 462 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 ISG15P05161 165 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 GLRXP35754 106 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 GNALP38405 381 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 MAP2K3P46734 347 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 TMEM33P57088 247 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 ERVS71-1P61550 626 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 IL13RA1P78552 427 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 ZNF92Q03936 586 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 DOC2BQ14184 412 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 SSX1Q16384 188 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 MSMPQ1L6U9 139 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 GPR107Q5VW38 600 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 COLCA1Q6ZS62 124 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 CLVS1Q8IUQ0 354 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 FTMTQ8N4E7 242 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 OR13F1Q8NGS4 319 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 OR13C5Q8NGS8 318 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 NANPQ8TBE9 248 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 RPS4Y2Q8TD47 263 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 YIPF5Q969M3 257 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 PGLYRP3Q96LB9 341 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 CHCHD6Q9BRQ6 235 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 ZNF319Q9P2F9 582 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 FZR1Q9UM11 496 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 STUB1Q9UNE7 303 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 GSTK1Q9Y2Q3 226 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 CMAHPQ9Y471 501 aa10.53□□□□□ -0.72
CLSTN3-208ENST00000538933 A0A1W2PPW3 197 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 C5orf63A6NC05 138 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 J3QLI3 93 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 AIREO43918 545 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 TIMM8AO60220 97 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 GADD45AP24522 165 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 SRSF4Q08170 494 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 RIPPLY1Q0D2K3 151 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 GK2Q14410 553 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 HLXQ14774 488 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms