RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TMEM17Q86X19 198 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF283Q8N7M2 679 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 WDSUB1Q8N9V3 476 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 OR4K17Q8NGC6 315 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 MARCH1Q8TCQ1 289 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF75AQ96N20 296 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 SPACA5Q96QH8 159 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 DEFB126Q9BYW3 111 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 GHRLQ9UBU3 117 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 SHPKQ9UHJ6 478 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 CDRT15L2A8MXV6 281 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 TEX46H3BTG2 121 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 OPN1LWP04000 364 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 SLC2A1P11166 492 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 SNTB1Q13884 538 aaKnown RBP12.78□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF273Q14593 569 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 TMEM176BQ3YBM2 270 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-207ENST00000538862 FAM74A1Q5RGS3 127 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 FAM57BQ71RH2 274 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 CCDC36Q8IYA8 594 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 FAM89BQ8N5H3 189 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 OR14K1Q8NGZ2 314 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 SNIP1Q8TAD8 396 aaKnown RBP12.78□□□□□ -0.36
CDCA3-207ENST00000538862 FAM71F1Q96KD3 344 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-207ENST00000538862 SOX7Q9BT81 388 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 CHMP1AQ9HD42 196 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-207ENST00000538862 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDCA3-207ENST00000538862 TAS2R3Q9NYW6 316 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 MBD2Q9UBB5 411 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 SDK2Q58EX2 2172 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 C5orf51A6NDU8 294 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 EEF1E1-BLOC1S5C9J1V9 151 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 MFNGO00587 321 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 TP53I11O14683 189 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 WDPCPO95876 746 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 IGLV3-1P01715 115 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 PRF1P14222 555 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 ATF4P18848 351 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-207ENST00000538862 SERPINF1P36955 418 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 ALDH3B1P43353 468 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 ECH1Q13011 328 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 ATXN7L3Q14CW9 347 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-207ENST00000538862 BEX5Q5H9J7 111 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 TMPPEQ6ZT21 453 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 GPER1Q99527 375 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 PIGMQ9H3S5 423 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 OCIAD1Q9NX40 245 aa12.78□□□□□ -0.36
CDCA3-207ENST00000538862 FAM208BQ5VWN6 2430 aa12.77□□□□□ -0.36
CDCA3-207ENST00000538862 A0A087WZY1 265 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 TEX13DA0A0J9YY54 714 aaPredicted RBP12.77□□□□□ -0.37
CDCA3-207ENST00000538862 F5H0A9 414 aaPredicted RBP12.77□□□□□ -0.37
CDCA3-207ENST00000538862 F8VVB4 439 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 F8VWA3 439 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 RAMP1O60894 148 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 SFTPDP35247 375 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 POLR2GP62487 172 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDCA3-207ENST00000538862 PPIAP62937 165 aaKnown RBP12.77□□□□□ -0.37
CDCA3-207ENST00000538862 IGF2-ASQ6U949 168 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 UQCC3Q6UW78 93 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 PEG10Q86TG7 708 aaKnown RBP12.77□□□□□ -0.37
CDCA3-207ENST00000538862 RTN4RL2Q86UN3 420 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 PPP1R3BQ86XI6 285 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 PNLDC1Q8NA58 520 aaKnown RBP12.77□□□□□ -0.37
CDCA3-207ENST00000538862 STOML3Q8TAV4 291 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 MS4A7Q9GZW8 240 aaPredicted RBP12.77□□□□□ -0.37
CDCA3-207ENST00000538862 OR10A2Q9H208 303 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 BANF2Q9H503 90 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 C5orf66Q9H5L9 145 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 RAB18Q9NP72 206 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 FOXJ2Q9P0K8 574 aa12.77□□□□□ -0.37
CDCA3-207ENST00000538862 CHCHD2Q9Y6H1 151 aaPredicted RBP12.77□□□□□ -0.37
CDCA3-207ENST00000538862 IGKV1-9A0A0C4DH69 117 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 RRP8O43159 456 aaKnown RBP12.76□□□□□ -0.37
CDCA3-207ENST00000538862 CRTAPO75718 401 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-207ENST00000538862 SFT2D2O95562 160 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 MSR1P21757 451 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 FPR2P25090 351 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 GUCA1AP43080 201 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-207ENST00000538862 CLDN17P56750 224 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 NAAAQ02083 359 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 LCN10Q6JVE6 187 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 MRPL14Q6P1L8 145 aaKnown RBP12.76□□□□□ -0.37
CDCA3-207ENST00000538862 SPACA3Q8IXA5 215 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 GTPBP8Q8N3Z3 284 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-207ENST00000538862 OR5AP2Q8NGF4 316 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 OR5H2Q8NGV7 314 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 ARHGAP5-AS1Q96IT6 56 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 A0A0U1RQV5 110 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 C13orf42A0A1B0GVH6 325 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 RAB19A4D1S5 217 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 C9orf172C9J069 976 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 RAD51DO75771 328 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 APOC3P02656 99 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 THBS4P35443 961 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 ZNF133P52736 654 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-207ENST00000538862 H3F3AP84243 136 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 C10orf128Q5T292 105 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 NSUN5P2Q63ZY6 315 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 ELP2Q6IA86 826 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 LHFPL1Q86WI0 220 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms