RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, human

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD9-208	ENST00000538834		H0YJX3	145 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	P2RY10	O00398	339 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	CDIPT	O14735	213 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	NDUFA2	O43678	99 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	CLIC3	O95833	236 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	ACAA1	P09110	424 aa	Predicted RBP	11.42	□□□□□ -0.58
CD9-208	ENST00000538834	LIMS3	P0CW19	117 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	LIMS4	P0CW20	117 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	FAH	P16930	419 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	GNAL	P38405	381 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	PAX8	Q06710	450 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	C11orf91	Q3C1V1	193 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	DHRSX	Q8N5I4	330 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	ZNF485	Q8NCK3	441 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	NRG4	Q8WWG1	115 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	C10orf35	Q96D05	121 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	NEIL1	Q96FI4	390 aa	Predicted RBP	11.42	□□□□□ -0.58
CD9-208	ENST00000538834	RNF170	Q96K19	258 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.42	□□□□□ -0.58
CD9-208	ENST00000538834	LPAR2	Q9HBW0	351 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	AMBN	Q9NP70	447 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	TRIM36	Q9NQ86	728 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	UBAP1	Q9NZ09	502 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	ENPP5	Q9UJA9	477 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	PIGL	Q9Y2B2	252 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	RPL36	Q9Y3U8	105 aa	Known RBP	11.42	□□□□□ -0.58
CD9-208	ENST00000538834	INSIG2	Q9Y5U4	225 aa		11.42	□□□□□ -0.58
CD9-208	ENST00000538834	TRAV38-1	A0A0B4J264	116 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	DAPL1	A0PJW8	107 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	PQLC2L	A1A4F0	135 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	NOS1AP	O75052	506 aa	Predicted RBP	11.41	□□□□□ -0.58
CD9-208	ENST00000538834	RPP14	O95059	124 aa	Known RBP	11.41	□□□□□ -0.58
CD9-208	ENST00000538834	FADS2	O95864	444 aa	Known RBP	11.41	□□□□□ -0.58
CD9-208	ENST00000538834	PPIAL4G	P0DN37	164 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	IRF2	P14316	349 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	MUC1	P15941	1255 aa	Predicted RBP	11.41	□□□□□ -0.58
CD9-208	ENST00000538834	MPZ	P25189	248 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	ATP6V1E1	P36543	226 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	TGM4	P49221	684 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	GNG3	P63215	75 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	LCN2	P80188	198 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	KLHL22	Q53GT1	634 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	CLVS2	Q5SYC1	327 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	WDR25	Q64LD2	544 aa	Predicted RBP	11.41	□□□□□ -0.58
CD9-208	ENST00000538834	IL17REL	Q6ZVW7	336 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	LHFPL3	Q86UP9	236 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	C19orf18	Q8NEA5	215 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	ZNF555	Q8NEP9	628 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	AQP3	Q92482	292 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	TFAP2C	Q92754	450 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	C12orf43	Q96C57	262 aa	Known RBP	11.41	□□□□□ -0.58
CD9-208	ENST00000538834	ADI1	Q9BV57	179 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	GNG8	Q9UK08	70 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834	PCDHB10	Q9UN67	800 aa		11.41	□□□□□ -0.58
CD9-208	ENST00000538834		A0A0G2JMP0	313 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834		A0A0X1KG70	313 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	KIR2DS1	A0A191URI9	304 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	NRAS	P01111	189 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	GNAO1	P09471	354 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	UBC	P0CG48	685 aa	Known RBP	11.4	□□□□□ -0.58
CD9-208	ENST00000538834	SRD5A1	P18405	259 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	CD80	P33681	288 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	CAPG	P40121	348 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	NPY4R	P50391	375 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	ACTA2	P62736	377 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	ACTG2	P63267	376 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	SLC34A1	Q06495	639 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	STUM	Q69YW2	141 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	CRIP3	Q6Q6R5	217 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	C1QL2	Q7Z5L3	287 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	OR4M2	Q8NGB6	313 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	CNIH3	Q8TBE1	160 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	LRRC29	Q8WV35	223 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	RPL3L	Q92901	407 aa	Known RBP	11.4	□□□□□ -0.58
CD9-208	ENST00000538834	C4orf36	Q96KX1	117 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.4	□□□□□ -0.58
CD9-208	ENST00000538834	DNTTIP1	Q9H147	329 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834	ISG20L2	Q9H9L3	353 aa	Known RBP	11.4	□□□□□ -0.58
CD9-208	ENST00000538834	PLCXD1	Q9NUJ7	323 aa		11.4	□□□□□ -0.58
CD9-208	ENST00000538834		A6NLC8	198 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	ZNF732	B4DXR9	585 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834		E9PI62	339 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	PHF1	O43189	567 aa	Predicted RBP	11.39	□□□□□ -0.59
CD9-208	ENST00000538834	RHBDL1	O75783	438 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	RPS2	P15880	293 aa	Known RBP	11.39	□□□□□ -0.59
CD9-208	ENST00000538834	HNF1A	P20823	631 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	DCK	P27707	260 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	GPM6A	P51674	278 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	ERVK11-1	P61568	191 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	MRPL28	Q13084	256 aa	Known RBP	11.39	□□□□□ -0.59
CD9-208	ENST00000538834	ALKBH1	Q13686	389 aa	Known RBP	11.39	□□□□□ -0.59
CD9-208	ENST00000538834	UBE2V2	Q15819	145 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	KCNJ8	Q15842	424 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	ESCO2	Q56NI9	601 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	CEP78	Q5JTW2	689 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	TMEM244	Q5VVB8	128 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	DCAF12L2	Q5VW00	463 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.39	□□□□□ -0.59
CD9-208	ENST00000538834	MOB3C	Q70IA8	216 aa		11.39	□□□□□ -0.59
CD9-208	ENST00000538834	RDH10	Q8IZV5	341 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms