RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 RAP1BP61224 184 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 PRTGQ2VWP7 1150 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 GALNTL5Q7Z4T8 443 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 SGPP2Q8IWX5 399 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 BSCL2Q96G97 398 aaPredicted RBP16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 TCTN2Q96GX1 697 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 UNKLQ9H9P5 680 aaKnown RBP16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 UCK1Q9HA47 277 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 WFDC1Q9HC57 220 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 TMEM131Q92545 1883 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 A0A1W2PP11 408 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 C17orf51A8MQB3 221 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 RPL36A-HNRNPH2H7BZ11 118 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 SCGB1D2O95969 90 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 IFNA10P01566 189 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 HLA-DOBP13765 273 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 GALNSP34059 522 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 ECI1P42126 302 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 DHPSP49366 369 aaPredicted RBP16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 SLC37A1P57057 533 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 ZNF674Q2M3X9 581 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 CLEC9AQ6UXN8 241 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 OR5AS1Q8N127 324 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 SLAMF6Q96DU3 332 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 C5orf34Q96MH7 638 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 SDHAF3Q9NRP4 125 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 A0A087WWC5 75 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 CRTAPO75718 401 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 DDTP30046 118 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 POLR2HP52434 150 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 PKIAP61925 76 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 CHRFAM7AQ494W8 412 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 ZNF248Q8NDW4 579 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 MFSD8Q8NHS3 518 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 MRPL24Q96A35 216 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 NTNG2Q96CW9 530 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 MEGF10Q96KG7 1140 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 ELOA3CA0A087WX78 387 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 ZNF587BE7ETH6 402 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 PPP1R2P9O14990 202 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST1H2BKO60814 126 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 RAMP1O60894 148 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST1H2BJP06899 126 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST1H2BOP23527 126 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST1H2BBP33778 126 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST1H2BDP58876 126 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 TAS2R60P59551 318 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST1H2BCP62807 126 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 TDGQ13569 410 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST2H2BEQ16778 126 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIKESHIQ53FT3 197 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 GPR157Q5UAW9 335 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 SULF2Q8IWU5 870 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 ZNF321PQ8N8H1 164 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 RNASE11Q8TAA1 199 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST1H2BHQ93079 126 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST1H2BNQ99877 126 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST1H2BMQ99879 126 aa16.39■□□□□ 0.21
SFSWAP-207ENST00000538548 FRG2CA6NGY1 282 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 GPR137BO60478 399 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 AHSA1O95433 338 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 PPP1CCP36873 323 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 GABRA4P48169 554 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 RUNX3Q13761 415 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 ELOBQ15370 118 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 RSU1Q15404 277 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 SPNS3Q6ZMD2 512 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 PRR22Q8IZ63 422 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 OR51E1Q8TCB6 317 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 SLC46A1Q96NT5 459 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 OR10A2Q9H208 303 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 SH3BGRL3Q9H299 93 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 WDR87Q6ZQQ6 2873 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 MBPP02686 304 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 FAM89BQ8N5H3 189 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 Q8WTZ3 238 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 HPSE2Q8WWQ2 592 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 ASB10Q8WXI3 467 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 TRIOBPQ9H2D6 2365 aa16.38■□□□□ 0.21
SFSWAP-207ENST00000538548 CXorf65A6NEN9 183 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 TSTD3H0UI37 97 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 APODP05090 189 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 CTSDP07339 412 aaPredicted RBP16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 ACY1Q03154 408 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 GAMTQ14353 236 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST3H2BBQ8N257 126 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 AVL9Q8NBF6 648 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 RARRES2Q99969 163 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 NELFAQ9H3P2 528 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 IGKV1D-43A0A0B4J1Z2 117 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 TLCD2A6NGC4 264 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 CRYM-AS1A6NIL9 109 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 H3BQ15 152 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 NSA2O95478 260 aaKnown RBP16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 SERPINA2P20848 420 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 APOBEC1P41238 236 aaKnown RBP16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 AFF3P51826 1226 aaKnown RBP16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 UBE2V2Q15819 145 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms