RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 ATPAF1Q5TC12 328 aaPredicted RBP15.19■□□□□ 0.02
SNX17-210ENST00000537606 APH1AQ96BI3 265 aa15.19■□□□□ 0.02
SNX17-210ENST00000537606 OR2A7Q96R45 310 aa15.19■□□□□ 0.02
SNX17-210ENST00000537606 FAM230AA0A1W2PPH8 454 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 ZNF587BE7ETH6 402 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 OR4E1P0C645 316 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 CXCL2P19875 107 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 NUBP1P53384 320 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 ZNF100Q8IYN0 542 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 TMEM178AQ8NBL3 297 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 WDYHV1Q96HA8 205 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 BCO1Q9HAY6 547 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 MGAQ8IWI9 3026 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 HRH1P35367 487 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 CXADRP78310 365 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 KRTAP27-1Q3LI81 207 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 OR8H3Q8N146 312 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 OR51T1Q8NGJ9 327 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 MRGPRFQ96AM1 343 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 RAB3CQ96E17 227 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 ELMOD3Q96FG2 381 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 ARHGAP5-AS1Q96IT6 56 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 B3GNT2Q9NY97 397 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 FBLN5Q9UBX5 448 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 OPN4Q9UHM6 478 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 PRSS50Q9UI38 385 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 VSIG4Q9Y279 399 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 PTPRBP23467 1997 aa15.18■□□□□ 0.02
SNX17-210ENST00000537606 OR14I1A6ND48 311 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 ACTL6AO96019 429 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 NOVA1P51513 510 aaKnown RBP15.17■□□□□ 0.02
SNX17-210ENST00000537606 SOX8P57073 446 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 RAP2BP61225 183 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 RIPPLY1Q0D2K3 151 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 DEFB109BQ30KR1 87 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 RNASE10Q5GAN6 216 aaKnown RBP15.17■□□□□ 0.02
SNX17-210ENST00000537606 OR2W3Q7Z3T1 314 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 CDH26Q8IXH8 852 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 LINC00470Q9BZP3 86 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 IRF2BPLQ9H1B7 796 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 PLSCR5A0PG75 271 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 ANGPTL7O43827 346 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 RAD51DO75771 328 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 MELTFP08582 738 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 CD79AP11912 226 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 EDN3P14138 238 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 MTCP1P56278 107 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 C11orf88Q6PI97 169 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 Q6ZSR3 168 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 IFT46Q9NQC8 304 aa15.17■□□□□ 0.02
SNX17-210ENST00000537606 SPRY1O43609 319 aaPredicted RBP15.16■□□□□ 0.02
SNX17-210ENST00000537606 PMP2P02689 132 aa15.16■□□□□ 0.02
SNX17-210ENST00000537606 MGMTP16455 207 aa15.16■□□□□ 0.02
SNX17-210ENST00000537606 S100A13Q99584 98 aa15.16■□□□□ 0.02
SNX17-210ENST00000537606 SLC25A21Q9BQT8 299 aaPredicted RBP15.16■□□□□ 0.02
SNX17-210ENST00000537606 IGKV1-27A0A075B6S5 117 aa15.16■□□□□ 0.02
SNX17-210ENST00000537606 ZNF724A8MTY0 619 aa15.16■□□□□ 0.02
SNX17-210ENST00000537606 SLC22A5O76082 557 aa15.16■□□□□ 0.02
SNX17-210ENST00000537606 CHRM2P08172 466 aa15.16■□□□□ 0.02
SNX17-210ENST00000537606 NAT2P11245 290 aa15.16■□□□□ 0.02
SNX17-210ENST00000537606 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
SNX17-210ENST00000537606 GSK3AP49840 483 aa15.16■□□□□ 0.02
SNX17-210ENST00000537606 GNG2P59768 71 aa15.16■□□□□ 0.02
SNX17-210ENST00000537606 FAM3AP98173 230 aa15.16■□□□□ 0.02
SNX17-210ENST00000537606 EXOSC2Q13868 293 aaKnown RBP15.16■□□□□ 0.02
SNX17-210ENST00000537606 RNPS1Q15287 305 aaKnown RBP15.16■□□□□ 0.02
SNX17-210ENST00000537606 DSPP15924 2871 aaKnown RBP15.16■□□□□ 0.02
SNX17-210ENST00000537606 NOS1APO75052 506 aaPredicted RBP15.15■□□□□ 0.02
SNX17-210ENST00000537606 TMEM225BP0DP42 221 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 HIST1H1DP16402 221 aaKnown RBP15.15■□□□□ 0.02
SNX17-210ENST00000537606 URM1Q9BTM9 101 aaKnown RBP15.15■□□□□ 0.02
SNX17-210ENST00000537606 CST11Q9H112 138 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 ZDHHC11Q9H8X9 412 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 ZNF230Q9UIE0 474 aaPredicted RBP15.15■□□□□ 0.02
SNX17-210ENST00000537606 C5orf49A4QMS7 147 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 SLC22A20A6NK97 555 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 OR2AT4A6NND4 320 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 DISC1C4P0D8 188 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 F5H5P2 479 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 ARPC5O15511 151 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 RPS27AP62979 156 aaKnown RBP15.15■□□□□ 0.02
SNX17-210ENST00000537606 DHRS2Q13268 280 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 LIN54Q6MZP7 749 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 PIGCQ92535 297 aa15.15■□□□□ 0.02
SNX17-210ENST00000537606 SVILO95425 2214 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 FXYD6-FXYD2A0A087WZ82 144 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 RPL36A-HNRNPH2H7BZ11 118 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 M0R233 179 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 UBBP0CG47 229 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 MED12LQ86YW9 2145 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 C12orf45Q8N5I9 185 aaPredicted RBP15.14■□□□□ 0.01
SNX17-210ENST00000537606 OR56B1Q8NGI3 324 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 C10orf35Q96D05 121 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 FXYD6Q9H0Q3 95 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 ALX4Q9H161 411 aaPredicted RBP15.14■□□□□ 0.01
SNX17-210ENST00000537606 CLEC4MQ9H2X3 399 aaPredicted RBP15.14■□□□□ 0.01
SNX17-210ENST00000537606 hCG_38984A0A1B0GV85 526 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 SCGNO76038 276 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 NRASP01111 189 aa15.14■□□□□ 0.01
SNX17-210ENST00000537606 ZNF24P17028 368 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms