RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 OPN5Q6U736 354 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 OR2Y1Q8NGV0 311 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 DCUN1D4Q92564 292 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 TCEAL3Q969E4 200 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 RRNAD1Q96FB5 475 aaKnown RBP11.3□□□□□ -0.6
TRIM25-202ENST00000537230 PIK3IP1Q96FE7 263 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 ANGPTL4Q9BY76 406 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 ESRP2Q9H6T0 727 aaKnown RBP11.3□□□□□ -0.6
TRIM25-202ENST00000537230 CHMP1AQ9HD42 196 aaPredicted RBP11.3□□□□□ -0.6
TRIM25-202ENST00000537230 SLC2A8Q9NY64 477 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 SHPKQ9UHJ6 478 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 ZNF407Q9C0G0 2248 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 A0A0J9YW62 118 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 TNFSF11O14788 317 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 EFSO43281 561 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 MPIG6BO95866 241 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 NTF4P34130 210 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 SERPINF1P36955 418 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 SSR4P51571 173 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 ZNF239Q16600 458 aaKnown RBP11.3□□□□□ -0.6
TRIM25-202ENST00000537230 H3F3CQ6NXT2 135 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 CRIP3Q6Q6R5 217 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 C1QL2Q7Z5L3 287 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 RPS19BP1Q86WX3 136 aaKnown RBP11.3□□□□□ -0.6
TRIM25-202ENST00000537230 SRXN1Q9BYN0 137 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 SH2D2AQ9NP31 389 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 ZNF629Q9UEG4 869 aaPredicted RBP11.3□□□□□ -0.6
TRIM25-202ENST00000537230 MRPS28Q9Y2Q9 187 aaKnown RBP11.3□□□□□ -0.6
TRIM25-202ENST00000537230 TTC28Q96AY4 2481 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 PCSK5Q92824 1860 aa11.3□□□□□ -0.6
TRIM25-202ENST00000537230 CRHP06850 196 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 PSMB6P28072 239 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 PRSS12P56730 875 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 ENDOGQ14249 297 aaKnown RBP11.29□□□□□ -0.6
TRIM25-202ENST00000537230 BHLHE23Q8NDY6 225 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 OR4A4PQ8NGN8 299 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 C12orf57Q99622 126 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 PRR13Q9NZ81 148 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 NSG1A0A0A6YYJ2 146 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 LOC102725191A0A1B0GVB3 256 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 C9J4A7 227 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 YKT6O15498 198 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 FGF16O43320 207 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 RAD51DO75771 328 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 F10P00742 488 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 PMP2P02689 132 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 NPBWR1P48145 328 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 CSNK1A1P48729 337 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 TMEM50BP56557 158 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 Q0VFX4 171 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 KCNMB1Q16558 191 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 FAM209BQ5JX69 171 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 ZIC4Q8N9L1 334 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 OR10R2Q8NGX6 335 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 MARCH1Q8TCQ1 289 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 NABP1Q96AH0 204 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 RBM24Q9BX46 236 aaKnown RBP11.29□□□□□ -0.6
TRIM25-202ENST00000537230 ZNF107Q9UII5 783 aaPredicted RBP11.29□□□□□ -0.6
TRIM25-202ENST00000537230 C19orf67A6NJJ6 358 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 LAMTOR5O43504 91 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 HCKP08631 526 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 SLC6A9P48067 706 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 EXT1Q16394 746 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 NKAPLQ5M9Q1 402 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 BAP18Q8IXM2 172 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 C2CD4CQ8TF44 421 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 RNF126Q9BV68 326 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 DKKL1Q9UK85 242 aa11.29□□□□□ -0.6
TRIM25-202ENST00000537230 MED13Q9UHV7 2174 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 H0YIZ8 118 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 HOXA1P49639 335 aaPredicted RBP11.28□□□□□ -0.6
TRIM25-202ENST00000537230 RAB13P51153 203 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 DSCR4P56555 118 aaPredicted RBP11.28□□□□□ -0.6
TRIM25-202ENST00000537230 AIMP2Q13155 320 aaKnown RBP11.28□□□□□ -0.6
TRIM25-202ENST00000537230 RAB11FIP2Q7L804 512 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 YRDCQ86U90 279 aaKnown RBP11.28□□□□□ -0.6
TRIM25-202ENST00000537230 TMEM123Q8N131 208 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 ARMC10Q8N2F6 343 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 ZDHHC22Q8N966 263 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 ZSCAN4Q8NAM6 433 aaPredicted RBP11.28□□□□□ -0.6
TRIM25-202ENST00000537230 OR9K2Q8NGE7 335 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 OR14K1Q8NGZ2 314 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 TMEM41AQ96HV5 264 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 MOB1AQ9H8S9 216 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 TREM1Q9NP99 234 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 MSGN1A6NI15 193 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 CDC14BO60729 498 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 DUS4LO95620 317 aaKnown RBP11.28□□□□□ -0.6
TRIM25-202ENST00000537230 RFPL3SP0C7P2 107 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 TPT1P13693 172 aaKnown RBP11.28□□□□□ -0.6
TRIM25-202ENST00000537230 MSR1P21757 451 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 MLF1P58340 268 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 S100A12P80511 92 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 M1APQ8TC57 530 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 ARL11Q969Q4 196 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 CPNE2Q96FN4 548 aaPredicted RBP11.28□□□□□ -0.6
TRIM25-202ENST00000537230 FAM96BQ9Y3D0 163 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 LAMA5O15230 3695 aa11.28□□□□□ -0.6
TRIM25-202ENST00000537230 BOD1L1Q8NFC6 3051 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 NPIPA2E9PIF3 369 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms