RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	BEX2	Q9BXY8	128 aa		3.18	□□□□□ -1.9
PRKDC-208	ENST00000536710	VAX2	Q9UIW0	290 aa		3.18	□□□□□ -1.9
PRKDC-208	ENST00000536710	RAB23	Q9ULC3	237 aa		3.18	□□□□□ -1.9
PRKDC-208	ENST00000536710	PPIL1	Q9Y3C6	166 aa		3.18	□□□□□ -1.9
PRKDC-208	ENST00000536710	TRAV8-6	A0A0B4J262	113 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	TVP23A	A6NH52	213 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	CENPBD1	B2RD01	187 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	PRMT5	O14744	637 aa	Predicted RBP	3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	POLR1C	O15160	346 aa	Predicted RBP	3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	SCO1	O75880	301 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	CCNO	P22674	350 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	GALR1	P47211	349 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	ETV1	P50549	477 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	MLF1	P58340	268 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	MOBP	Q13875	183 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	TAL2	Q16559	108 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	FAM27D1	Q5T7N8	215 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	AADACL4	Q5VUY2	407 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	PID1	Q7Z2X4	250 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	SFXN5	Q8TD22	340 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	SNF8	Q96H20	258 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710	HINT2	Q9BX68	163 aa		3.17	□□□□□ -1.9
PRKDC-208	ENST00000536710		J3QT63	122 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	CCDC22	O60826	627 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	ALOX12B	O75342	701 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	RCBTB2	O95199	551 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	MMP7	P09237	267 aa	Predicted RBP	3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	PMEL	P40967	661 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	PPP1CA	P62136	330 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	ADIG	Q0VDE8	80 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	LAMTOR4	Q0VGL1	99 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	HHAT	Q5VTY9	493 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	EPGN	Q6UW88	154 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	IGFL3	Q6UXB1	125 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	LRRC52	Q8N7C0	313 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	ZNF615	Q8N8J6	731 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	OR6N2	Q8NGY6	317 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	C17orf50	Q8WW18	174 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	GLT1D1	Q96MS3	346 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	STMN4	Q9H169	189 aa	Predicted RBP	3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	TAS2R5	Q9NYW4	299 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	ENPP4	Q9Y6X5	453 aa		3.16	□□□□□ -1.9
PRKDC-208	ENST00000536710	IGLV3-12	A0A075B6K2	115 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	FAM240A	A0A1B0GVK7	77 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	ANKRD20A5P	A0PJZ0	165 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	ISPD	A4D126	451 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	RAB19	A4D1S5	217 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710		E7EWF7	191 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710		K7EN84	100 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	PSMD11	O00231	422 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	ENSA	O43768	121 aa	Known RBP	3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	IGLV2-8	P01709	118 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	OR5AL1	P0C617	328 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	PRSS3	P35030	304 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	PSMB2	P49721	201 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	TAS2R43	P59537	309 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	TNNC1	P63316	161 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	NEGR1	Q7Z3B1	354 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	S100PBP	Q96BU1	408 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	MSANTD3	Q96H12	275 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	GPR82	Q96P67	336 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	C20orf144	Q9BQM9	153 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	AGPAT3	Q9NRZ7	376 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	ORC6	Q9Y5N6	252 aa		3.15	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZNF608	Q9ULD9	1512 aa	Predicted RBP	3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	IGLV2-18	A0A075B6J9	118 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	CCL15-CCL14	A0A0B4J2E2	113 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	IGHV1-3	A0A0C4DH29	117 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	BTNL10	A8MVZ5	291 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	RBBP9	O75884	186 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	LIPC	P11150	499 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	PSMB5	P28074	263 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	RGS6	P49758	472 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	CMC4	P56277	68 aa	Predicted RBP	3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	IL5RA	Q01344	420 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	DYNC1I2	Q13409	638 aa	Known RBP	3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	CCL15	Q16663	113 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	KLHL12	Q53G59	568 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	UNQ9165/PRO28630	Q6UXU0	137 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	OSR2	Q8N2R0	312 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	TMEM105	Q8N8V8	129 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	OR2Z1	Q8NG97	314 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZFAND1	Q8TCF1	268 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	CDKL2	Q92772	493 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	MRPL48	Q96GC5	212 aa	Known RBP	3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	RSPO3	Q9BXY4	272 aa	Predicted RBP	3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZNF717	Q9BY31	904 aa	Predicted RBP	3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	PRRG3	Q9BZD7	231 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	COA1	Q9GZY4	146 aa		3.14	□□□□□ -1.91
PRKDC-208	ENST00000536710	IGKV6-21	A0A0C4DH24	114 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	GATC	O43716	136 aa	Known RBP	3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	NDUFS5	O43920	106 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	IVL	P07476	585 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	PAX6	P26367	422 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	IL3RA	P26951	378 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	GRB2	P62993	217 aa	Known RBP	3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZNF616	Q08AN1	781 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	VAMP3	Q15836	100 aa		3.13	□□□□□ -1.91
PRKDC-208	ENST00000536710	PRSS8	Q16651	343 aa		3.13	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms