RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 OR5T2Q8NGG2 359 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 ZNRF4Q8WWF5 429 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 DNAJC9Q8WXX5 260 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 OR5P3Q8WZ94 311 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 RPL3LQ92901 407 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 ITPKCQ96DU7 683 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 CHID1Q9BWS9 393 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 C1orf21Q9H246 121 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 MED20Q9H944 212 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 TMEM269A0A1B0GVZ9 245 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 OR2AT4A6NND4 320 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 KCNAB3O43448 404 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 AKR7A2O43488 359 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 OSMP13725 252 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 TGM4P49221 684 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 UBE2E1P51965 193 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 ESRRGP62508 458 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 SMIM21Q3B7S5 101 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 ATPAF1Q5TC12 328 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 PLCXD3Q63HM9 321 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 STUMQ69YW2 141 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 C1orf122Q6ZSJ8 110 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 PIGWQ7Z7B1 504 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 SPATA24Q86W54 205 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 LY6G5BQ8NDX9 201 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 OR4C13Q8NGP0 309 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 LINC01006Q8NI28 216 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 ASB17Q8WXJ9 295 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 TAF15Q92804 592 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 CLPTM1LQ96KA5 538 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 RAB3IPQ96QF0 476 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 CITED1Q99966 193 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 NIPSNAP1Q9BPW8 284 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 TLNRD1Q9H1K6 362 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 HEXA-AS1Q9H8Q6 139 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 RASL12Q9NYN1 266 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 ZNRD1Q9P1U0 126 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 ENPP5Q9UJA9 477 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 IKZF2Q9UKS7 526 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 POLDIP2Q9Y2S7 368 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 TENM1Q9UKZ4 2725 aa10.91□□□□□ -0.66
CLSTN3-205ENST00000535452 A0A1W2PRD5 423 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 A0A1W2PRF3 423 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 A0A1W2PRM7 423 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 TCRBV5S2A0A599 114 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 SLC22A31A6NKX4 558 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 ZNF732B4DXR9 585 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 ANGPTL7O43827 346 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 ZNF254O75437 659 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 CSF1P09603 554 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 GABRA5P31644 462 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 GPM6AP51674 278 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 RIDAP52758 137 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 CAV3P56539 151 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 HOXA4Q00056 320 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 SNAPC1Q16533 368 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 CEACAM21Q3KPI0 293 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 ARSJQ5FYB0 599 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 ZNF684Q5T5D7 378 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 LINC01590Q5TEZ4 76 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 DEGS2Q6QHC5 323 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 MOB3CQ70IA8 216 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 CPOQ8IVL8 374 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 OR2T6Q8NHC8 308 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 RBM4BQ9BQ04 359 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 YIPF3Q9GZM5 350 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 PPA2Q9H2U2 334 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 ABCB10Q9NRK6 738 aa10.9□□□□□ -0.66
CLSTN3-205ENST00000535452 AQP12BA6NM10 295 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 SIGLEC5O15389 551 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 SELENOFO60613 162 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 CLPXO76031 633 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 ACAA1P09110 424 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 SAA4P35542 130 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 DNAL1Q4LDG9 190 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 ZBTB37Q5TC79 503 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 HAGHLQ6PII5 290 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 ZNF788Q6ZQV5 615 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 WDR86Q86TI4 376 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 ZNF573Q86YE8 665 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 AQP12AQ8IXF9 295 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 C11orf53Q8IXP5 236 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 ZSCAN4Q8NAM6 433 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 OR5A2Q8NGI9 324 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 C8orf46Q8TAG6 207 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 DUS3LQ96G46 650 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 THTPAQ9BU02 230 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 ADI1Q9BV57 179 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 MOB1AQ9H8S9 216 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 PLEKHA1Q9HB21 404 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 ENOPH1Q9UHY7 261 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 LRP12Q9Y561 859 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 MGAM2Q2M2H8 2515 aa10.89□□□□□ -0.67
CLSTN3-205ENST00000535452 A0A0U1RQV5 110 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 C5orf63A6NC05 138 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 GYG2O15488 501 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 RELBQ01201 579 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 APOFQ13790 326 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 FLOT2Q14254 428 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 CEP78Q5JTW2 689 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms