RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 TMEM14AQ9Y6G1 99 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 TRRAPQ9Y4A5 3859 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 A0A0U1RQV5 110 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 TMEM269A0A1B0GVZ9 245 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 AKR7A2O43488 359 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 DNAJC8O75937 253 aaPredicted RBP13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 KNG1P01042 644 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 MRPL3P09001 348 aaKnown RBP13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 GPM6AP51674 278 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 ASRGL1Q7L266 308 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 THAP5Q7Z6K1 395 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 KIR3DL3Q8N743 410 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 HPSE2Q8WWQ2 592 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 ASB17Q8WXJ9 295 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 H1FXQ92522 213 aaKnown RBP13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 ITFG2Q969R8 447 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 MED30Q96HR3 178 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 TEAD3Q99594 435 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 DCTN5Q9BTE1 182 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 PRRG3Q9BZD7 231 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 FAM96BQ9Y3D0 163 aa13.34□□□□□ -0.27
CLSTN3-204ENST00000535313 MEGF8Q7Z7M0 2845 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 A0A0U1RQK1 487 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 PSMD9O00233 223 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 GSC2O15499 205 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 ZNF254O75437 659 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 NDUFA7O95182 113 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 ATP6V1B1P15313 513 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 AMY2BP19961 511 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 EEF1B2P24534 225 aaKnown RBP13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 RPL15P61313 204 aaKnown RBP13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 GNG3P63215 75 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 ZNF829Q3KNS6 432 aaPredicted RBP13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 C17orf107Q6ZR85 190 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 DYRK2Q92630 601 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 UTP4Q969X6 686 aaKnown RBP13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 FGF23Q9GZV9 251 aaPredicted RBP13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 FAM206AQ9NX38 181 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 C1RLQ9NZP8 487 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 NLKQ9UBE8 527 aa13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 SLC25A10Q9UBX3 287 aaPredicted RBP13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 CAB39Q9Y376 341 aaPredicted RBP13.33□□□□□ -0.28
CLSTN3-204ENST00000535313 CCDC182A6NF36 153 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 ZNF732B4DXR9 585 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 SELLP14151 372 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 GLRA1P23415 457 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 DCTDP32321 178 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 RIDAP52758 137 aaKnown RBP13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 ESRRGP62508 458 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 GUCA2AQ02747 115 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 ROM1Q03395 351 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 RIPPLY1Q0D2K3 151 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 PTGES3Q15185 160 aaKnown RBP13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 CEACAM21Q3KPI0 293 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 CEP78Q5JTW2 689 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 OLFML2AQ68BL7 652 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 FAHD1Q6P587 224 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 METAP1DQ6UB28 335 aaPredicted RBP13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 ZNF788Q6ZQV5 615 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 KRT74Q7RTS7 529 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 LDLRAD3Q86YD5 345 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 ZNF679Q8IYX0 411 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 ANGPTL6Q8NI99 470 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 C8orf46Q8TAG6 207 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 ZNF671Q8TAW3 534 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 NPRL2Q8WTW4 380 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 GAFA1Q96PS6 74 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 OR8B4Q96RC9 309 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 CNN2Q99439 309 aaKnown RBP13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 PBOV1Q9GZY1 135 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 OR51I2Q9H344 312 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 DPAGT1Q9H3H5 408 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 GPR84Q9NQS5 396 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 SIRT7Q9NRC8 400 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 H2AFY2Q9P0M6 372 aaPredicted RBP13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 IKZF2Q9UKS7 526 aa13.32□□□□□ -0.28
CLSTN3-204ENST00000535313 OR2AT4A6NND4 320 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 SIGLEC5O15389 551 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 RHBDL1O75783 438 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 IGHV4-59P01825 116 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 ACAA1P09110 424 aaPredicted RBP13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 NDUFB7P17568 137 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 IER3P46695 156 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 GABRA2P47869 451 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 DAPP51397 102 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 DGUOKQ16854 277 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 TREML4Q6UXN2 200 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 MOB3CQ70IA8 216 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 PIP4P2Q8N4L2 257 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 OR5A2Q8NGI9 324 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 OR5K1Q8NHB7 308 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 OR51E1Q8TCB6 317 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 WFDC12Q8WWY7 111 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 KRT84Q9NSB2 600 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 ENPP5Q9UJA9 477 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 COPS3Q9UNS2 423 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 PIGLQ9Y2B2 252 aa13.31□□□□□ -0.28
CLSTN3-204ENST00000535313 A0A1W2PQ09 198 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 CLPSL1A2RUU4 121 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 BTBD17A6NE02 478 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms